myRT

myRT report for GCA_900639335.1_E7067_hybrid_assembly

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Seq: LR135237.1 Enterococcus faecium isolate E7067 genome assembly, plasmid: 3 (60014 bp)
Overview 1 RT 1: 38810-55853 bp Neighborhood of RT #1 [38810, 55853] Glucosaminidase Peptidase_M23 RVT-GII HNHc VirB4 KOG4744 TraG-D_C RVT-GII HNH_4 TraG_VirD4 TraG_VirD4 Feature: gene Location: 38810-40015 bp Feature: domain Description: Glucosaminidase Location: 39086-39482 bp Feature: domain Description: Glucosaminidase Location: 39086-39482 bp Feature: domain Description: Peptidase_M23 Location: 39659-39896 bp Feature: domain Description: Peptidase_M23 Location: 39659-39896 bp Feature: gene Location: 40015-40335 bp Feature: gene Location: 40523-42400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40838-41576 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40838-41 576 bp Feature: domain Description: HNHc Note: nucleases Location: 42134-42287 bp Feature: domain Description: HNHc Note: nucleases Location: 421 34-42287 bp Feature: gene Location: 42587-42820 bp Feature: gene Location: 43088-44782 bp Feature: domain Description: VirB4 Location: 43406-44090 bp Feature: domain Description: VirB4 Location: 43406-44090 bp Feature: gene Location: 45923-48442 bp Feature: domain Description: KOG4744 Location: 46535-47492 bp Feature: domain Description: KOG4744 Location: 46535-47492 bp Feature: gene Location: 48439-49230 bp Feature: domain Description: TraG-D_C Location: 48442-48748 bp Feature: domain Description: TraG-D_C Location: 48442-48748 bp Feature: gene Location: 49356-51272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49695-50430 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49695-50430 bp Feature: domain Description: HNH_4 Location: 51024-51129 bp Feature: domain Description: HNH_4 Location: 51 024-51 1 29 bp Feature: gene Location: 51967-53799 bp Feature: domain Description: TraG_VirD4 Location: 52546-53224 bp Feature: domain Description: TraG_VirD4 Location: 52546-53224 bp Feature: domain Description: TraG_VirD4 Location: 53611-53776 bp Feature: domain Description: TraG_VirD4 Location: 5361 1 -53776 bp Feature: gene Location: 53799-55853 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551), RVT-GII, HNHc (smart00507), VirB4 (COG3451), KOG4744 (KOG4744, Uncharacterized conserved protein ), TraG-D_C (pfam12696), HNH_4 (pfam13395), TraG_VirD4

Seq: LR135238.1 Enterococcus faecium isolate E7067 genome assembly, plasmid: 4 (55118 bp)
Overview 1 RT 1: 14628-30795 bp Neighborhood of RT #1 [14628, 30800] TraG_VirD4 TraG_VirD4 RVT-GII HNH_4 TraG-D_C VirB4 RVT-GII HNHc MazE Feature: gene Location: 14628-16682 bp Feature: gene Location: 16682-18514 bp Feature: domain Description: TraG_VirD4 Location: 17261-17939 bp Feature: domain Description: TraG_VirD4 Location: 172 61-17939 bp Feature: domain Description: TraG_VirD4 Location: 18326-18491 bp Feature: domain Description: TraG_VirD4 Location: 1832 6-18491 bp Feature: gene Location: 19209-21125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19548-20283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19548-2 02 83 bp Feature: domain Description: HNH_4 Location: 20877-20982 bp Feature: domain Description: HNH_4 Location: 2 0877-2 0982 bp Feature: gene Location: 21251-22042 bp Feature: domain Description: TraG-D_C Location: 21254-21560 bp Feature: domain Description: TraG-D_C Location: 2 12 54-2 1560 bp Feature: gene Location: 22039-24570 bp Feature: gene Location: 25711-27405 bp Feature: domain Description: VirB4 Location: 26029-26713 bp Feature: domain Description: VirB4 Location: 2 602 9-2 6713 bp Feature: gene Location: 27673-27906 bp Feature: gene Location: 28093-29970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28408-29146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 8408-2 9146 bp Feature: domain Description: HNHc Note: nucleases Location: 29704-29857 bp Feature: domain Description: HNHc Note: nucleases Location: 2 9704-2 9857 bp Feature: gene Location: 30158-30478 bp Feature: gene Location: 30537-30800 bp Feature: domain Description: MazE Location: 30558-30795 bp Feature: domain Description: MazE Location: 30558-30795 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG_VirD4, RVT-GII, HNH_4 (pfam13395), TraG-D_C (pfam12696), VirB4 (COG3451), HNHc (smart00507), MazE (COG2336)