myRT

myRT report for GCA_900639355.1_E7025_hybrid_assembly

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Seq: LR135226.1 Enterococcus faecium isolate E7025 genome assembly, chromosome: 1 (2806840 bp)
Overview 1 RT 1: 271162-277553 bp Neighborhood of RT #1 [271162, 277567] FtsK HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA Feature: gene Location: 271162-272547 bp Feature: domain Description: FtsK Location: 271771-272404 bp Feature: domain Description: FtsK Location: 271 771 -272404 bp Feature: gene Location: 272726-273931 bp Feature: domain Description: HTH_XRE Location: 272771-272915 bp Feature: domain Description: HTH_XRE Location: 272771 -27291 5 bp Feature: domain Description: Rol_Rep_N Location: 272942-273209 bp Feature: domain Description: Rol_Rep_N Location: 272942-273209 bp Feature: domain Description: Rep_trans Location: 273233-273842 bp Feature: domain Description: Rep_trans Location: 273233-273842 bp Feature: gene Location: 274715-276625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 275048-275786 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 275048-275786 bp Feature: domain Description: HNHc Note: nucleases Location: 276341-276506 bp Feature: domain Description: HNHc Note: nucleases Location: 276341 -276506 bp Feature: gene Location: 276786-276953 bp Feature: gene Location: 277070-277567 bp Feature: domain Description: ArdA Location: 277088-277553 bp Feature: domain Description: ArdA Location: 277088-277553 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FtsK (COG1674), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), RVT-GII, HNHc (smart00507), ArdA (pfam07275)

Seq: LR135228.1 Enterococcus faecium isolate E7025 genome assembly, plasmid: 3 (56226 bp)
Overview 1 RT 1: 14598-31532 bp Neighborhood of RT #1 [14598, 31651] TraG_VirD4 TraG_VirD4 RVT-GII HNH_4 TraG-D_C VirB4 RVT-GII HNHc Glucosaminidase Peptidase_M23 Feature: gene Location: 14598-16652 bp Feature: gene Location: 16652-18484 bp Feature: domain Description: TraG_VirD4 Location: 17231-17909 bp Feature: domain Description: TraG_VirD4 Location: 172 31-17909 bp Feature: domain Description: TraG_VirD4 Location: 18296-18461 bp Feature: domain Description: TraG_VirD4 Location: 182 96-18461 bp Feature: gene Location: 19179-21095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19518-20253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19518-2 02 53 bp Feature: domain Description: HNH_4 Location: 20847-20952 bp Feature: domain Description: HNH_4 Location: 2 0847-2 0952 bp Feature: gene Location: 21221-22012 bp Feature: domain Description: TraG-D_C Location: 21224-21530 bp Feature: domain Description: TraG-D_C Location: 2 12 2 4-2 1530 bp Feature: gene Location: 22009-24540 bp Feature: gene Location: 25679-27373 bp Feature: domain Description: VirB4 Location: 25997-26681 bp Feature: domain Description: VirB4 Location: 2 5997-2 6681 bp Feature: gene Location: 27641-27874 bp Feature: gene Location: 28061-29938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28376-29114 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 8376-2 9114 bp Feature: domain Description: HNHc Note: nucleases Location: 29672-29825 bp Feature: domain Description: HNHc Note: nucleases Location: 2 9672 -2 982 5 bp Feature: gene Location: 30126-30446 bp Feature: gene Location: 30446-31651 bp Feature: domain Description: Glucosaminidase Location: 30722-31118 bp Feature: domain Description: Glucosaminidase Location: 3072 2 -31118 bp Feature: domain Description: Peptidase_M23 Location: 31295-31532 bp Feature: domain Description: Peptidase_M2 3 Location: 312 95-31532 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG_VirD4, RVT-GII, HNH_4 (pfam13395), TraG-D_C (pfam12696), VirB4 (COG3451), HNHc (smart00507), Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551)