myRT

myRT report for GCA_900639365.1_E7171_hybrid_assembly

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Seq: LR135203.1 Enterococcus faecium isolate E7171 genome assembly, chromosome: 1 (2804950 bp)
Overview 1 RT 1: 273061-279452 bp Neighborhood of RT #1 [273061, 279466] FtsK HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA Feature: gene Location: 273061-274446 bp Feature: domain Description: FtsK Location: 273670-274303 bp Feature: domain Description: FtsK Location: 273670-274303 bp Feature: gene Location: 274625-275830 bp Feature: domain Description: HTH_XRE Location: 274670-274814 bp Feature: domain Description: HTH_XRE Location: 274670-27481 4 bp Feature: domain Description: Rol_Rep_N Location: 274841-275108 bp Feature: domain Description: Rol_Rep_N Location: 274841 -2751 08 bp Feature: domain Description: Rep_trans Location: 275132-275741 bp Feature: domain Description: Rep_trans Location: 2751 32-275741 bp Feature: gene Location: 276614-278524 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276947-277685 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276947-277685 bp Feature: domain Description: HNHc Note: nucleases Location: 278240-278405 bp Feature: domain Description: HNHc Note: nucleases Location: 278240-278405 bp Feature: gene Location: 278685-278852 bp Feature: gene Location: 278969-279466 bp Feature: domain Description: ArdA Location: 278987-279452 bp Feature: domain Description: ArdA Location: 278987-279452 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FtsK (COG1674), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), RVT-GII, HNHc (smart00507), ArdA (pfam07275)

Seq: LR135204.1 Enterococcus faecium isolate E7171 genome assembly, plasmid: 2 (231143 bp)
Overview 1 RT 1: 19985-25832 bp Neighborhood of RT #1 [19985, 25951] VirB4 RVT-GII HNHc Glucosaminidase Peptidase_M23 Feature: gene Location: 19985-21679 bp Feature: domain Description: VirB4 Location: 20303-20987 bp Feature: domain Description: VirB4 Location: 2 0303-2 0987 bp Feature: gene Location: 21947-22180 bp Feature: gene Location: 22367-24244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22682-23420 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 682 -2 342 0 bp Feature: domain Description: HNHc Note: nucleases Location: 23978-24131 bp Feature: domain Description: HNHc Note: nucleases Location: 2 3978-2 4131 bp Feature: gene Location: 24432-24752 bp Feature: gene Location: 24752-25951 bp Feature: domain Description: Glucosaminidase Location: 25022-25418 bp Feature: domain Description: Glucosaminidase Location: 2 502 2 -2 5418 bp Feature: domain Description: Peptidase_M23 Location: 25595-25832 bp Feature: domain Description: Peptidase_M2 3 Location: 2 5595-2 5832 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirB4 (COG3451), RVT-GII, HNHc (smart00507), Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551)