myRT

myRT report for GCA_900639395.1_E6975_hybrid_assembly

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Seq: LR135278.1 Enterococcus faecium isolate E6975 genome assembly, chromosome: 1 (2919744 bp)
Overview 1 RT 1: 1074721-1081161 bp 2 RT 2: 1992129-1997169 bp Neighborhood of RT #1 [1074721, 1081199] Transposase_mut AAA_10 RVT-GII DDE_Tnp_1_3 AAA_10 Neighborhood of RT #2 [1992129, 1997183] HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA Feature: gene Location: 1074721-1075032 bp Feature: domain Description: Transposase_mut Location: 1074724-1075030 bp Feature: domain Description: Transposase_mut Location: 1 074724-1 075030 bp Feature: gene Location: 1075125-1075943 bp Feature: domain Description: AAA_10 Location: 1075131-1075929 bp Feature: domain Description: AAA_1 0 Location: 1 0751 31 -1 075929 bp Feature: gene Location: 1076077-1077861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1076335-1077034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 076335-1 077034 bp Feature: gene Location: 1078301-1079209 bp Feature: domain Description: DDE_Tnp_1_3 Location: 1078655-1079072 bp Feature: domain Description: DDE_Tnp_1 _3 Location: 1 078655-1 079072 bp Feature: gene Location: 1079649-1081199 bp Feature: domain Description: AAA_10 Location: 1080978-1081161 bp Feature: domain Description: AAA_1 0 Location: 1 080978-1 081 1 61 bp Feature: gene Location: 1992129-1992272 bp Feature: gene Location: 1992365-1993549 bp Feature: domain Description: HTH_XRE Location: 1992395-1992539 bp Feature: domain Description: HTH_XRE Location: 1 992395-1 992539 bp Feature: domain Description: Rol_Rep_N Location: 1992572-1992836 bp Feature: domain Description: Rol_Rep_N Location: 1 992572-1 992836 bp Feature: domain Description: Rep_trans Location: 1992860-1993472 bp Feature: domain Description: Rep_trans Location: 1 992860-1 993472 bp Feature: gene Location: 1994429-1996339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1994762-1995500 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 994762-1 995500 bp Feature: domain Description: HNHc Note: nucleases Location: 1996055-1996220 bp Feature: domain Description: HNHc Note: nucleases Location: 1 996055-1 996220 bp Feature: gene Location: 1996527-1996667 bp Feature: gene Location: 1996680-1997183 bp Feature: domain Description: ArdA Location: 1996698-1997169 bp Feature: domain Description: ArdA Location: 1 996698-1 9971 69 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Transposase_mut (pfam00872), AAA_10 (pfam12846), RVT-GII, DDE_Tnp_1_3 (pfam13612), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), HNHc (smart00507), ArdA (pfam07275)

Seq: LR135281.1 Enterococcus faecium isolate E6975 genome assembly, plasmid: 4 (39397 bp)
Overview 1 RT 1: 21797-26943 bp Neighborhood of RT #1 [21797, 26972] Tra8 RVT-AbiP2 HsdM Rve Feature: gene Location: 21797-21958 bp Feature: gene Location: 22041-22994 bp Feature: domain Description: Tra8 Location: 22044-22971 bp Feature: domain Description: Tra8 Location: 2 2 044-2 2 971 bp Feature: gene Location: 22972-24447 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 23320-23785 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2 332 0-2 3785 bp Feature: gene Location: 24785-26263 bp Feature: domain Description: HsdM Location: 24806-26231 bp Feature: domain Description: HsdM Location: 2 4806-2 62 31 bp Feature: gene Location: 26286-26972 bp Feature: domain Description: Rve Location: 26295-26943 bp Feature: domain Description: Rve Location: 2 62 95-2 6943 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra8 (COG2826), RVT-AbiP2, HsdM (COG0286), Rve (COG3316)