myRT

myRT report for GCA_900639445.1_E7199_hybrid_assembly

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Seq: LR135287.1 Enterococcus faecium isolate E7199 genome assembly, chromosome: 1 (2829644 bp)
Overview 1 RT 1: 1877092-1883702 bp Neighborhood of RT #1 [1877092, 1883773] Transposase_mut AAA_10 RVT-GII AAA_10 TcpE Feature: gene Location: 1877092-1878279 bp Feature: domain Description: Transposase_mut Location: 1877095-1878238 bp Feature: domain Description: Transposase_mut Location: 1 877095-1 878238 bp Feature: gene Location: 1878372-1879190 bp Feature: domain Description: AAA_10 Location: 1878378-1879176 bp Feature: domain Description: AAA_1 0 Location: 1 878378-1 8791 76 bp Feature: gene Location: 1879324-1881150 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1879624-1880323 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 879624-1 880323 bp Feature: gene Location: 1881847-1883397 bp Feature: domain Description: AAA_10 Location: 1883176-1883359 bp Feature: domain Description: AAA_1 0 Location: 1 8831 76-1 883359 bp Feature: gene Location: 1883384-1883773 bp Feature: domain Description: TcpE Location: 1883402-1883702 bp Feature: domain Description: TcpE Location: 1 883402-1 883702 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Transposase_mut (pfam00872), AAA_10 (pfam12846), RVT-GII, TcpE (pfam12648)

Seq: LR135289.1 Enterococcus faecium isolate E7199 genome assembly, plasmid: 3 (45824 bp)
Overview 1 RT 1: 30900-36753 bp Neighborhood of RT #1 [30900, 36872] VirB4 RVT-GII HNHc Glucosaminidase Peptidase_M23 Feature: gene Location: 30900-32594 bp Feature: domain Description: VirB4 Location: 31218-31902 bp Feature: domain Description: VirB4 Location: 312 18-31902 bp Feature: gene Location: 32862-33095 bp Feature: gene Location: 33282-35159 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33597-34335 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33597-34335 bp Feature: domain Description: HNHc Note: nucleases Location: 34893-35046 bp Feature: domain Description: HNHc Note: nucleases Location: 34893-35046 bp Feature: gene Location: 35347-35667 bp Feature: gene Location: 35667-36872 bp Feature: domain Description: Glucosaminidase Location: 35943-36339 bp Feature: domain Description: Glucosaminidase Location: 35943-36339 bp Feature: domain Description: Peptidase_M23 Location: 36516-36753 bp Feature: domain Description: Peptidase_M2 3 Location: 36516-36753 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirB4 (COG3451), RVT-GII, HNHc (smart00507), Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551)