myRT

myRT report for GCA_900639505.1_E7356_hybrid_assembly

Download annotations/find similar RTs

Seq: LR135339.1 Enterococcus faecium isolate E7356 genome assembly, chromosome: 1 (2889514 bp)
Overview 1 RT 1: 1223871-1229720 bp 2 RT 2: 1869743-1874481 bp 3 RT 3: 2730564-2741469 bp Neighborhood of RT #1 [1223871, 1229743] PRK06019 Adenylsuccinate_lyase_1 RVT-GII GIIM PRK09362 Neighborhood of RT #2 [1869743, 1874558] ArdA RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans Neighborhood of RT #3 [2730564, 2741483] RelB_DinJ FtsK_SpoIIIE RVT-GII HNHc FtsK Dcm HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA Feature: gene Location: 1223871-1224995 bp Feature: domain Description: PRK06019 Location: 1223895-1224984 bp Feature: domain Description: PRK0601 9 Location: 1 223895-1 224984 bp Feature: gene Location: 1225008-1226303 bp Feature: domain Description: Adenylsuccinate_lyase_1 Location: 1225020-1226289 bp Feature: domain Description: Adenylsuccinate_lyase_1 Location: 1 225020-1 226289 bp Feature: gene Location: 1226425-1227813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1226746-1227361 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 226746-1 227361 bp Feature: domain Description: GIIM Note: maturase Location: 1227418-1227634 bp Feature: domain Description: GIIM Note: maturase Location: 1 22741 8-1 227634 bp Feature: gene Location: 1228382-1228759 bp Feature: gene Location: 1229015-1229743 bp Feature: domain Description: PRK09362 Location: 1229018-1229720 bp Feature: domain Description: PRK09362 Location: 1 22901 8-1 229720 bp Feature: gene Location: 1869743-1870243 bp Feature: domain Description: ArdA Location: 1869761-1870232 bp Feature: domain Description: ArdA Location: 1 869761 -1 870232 bp Feature: gene Location: 1870256-1870408 bp Feature: gene Location: 1870584-1872494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1870917-1871655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 87091 7-1 871 655 bp Feature: domain Description: HNHc Note: nucleases Location: 1872210-1872375 bp Feature: domain Description: HNHc Note: nucleases Location: 1 87221 0-1 872375 bp Feature: gene Location: 1873003-1873152 bp Feature: gene Location: 1873374-1874558 bp Feature: domain Description: HTH_XRE Location: 1873404-1873548 bp Feature: domain Description: HTH_XRE Location: 1 873404-1 873548 bp Feature: domain Description: Rol_Rep_N Location: 1873581-1873845 bp Feature: domain Description: Rol_Rep_N Location: 1 873581 -1 873845 bp Feature: domain Description: Rep_trans Location: 1873869-1874481 bp Feature: domain Description: Rep_trans Location: 1 873869-1 874481 bp Feature: gene Location: 2730564-2730908 bp Feature: domain Description: RelB_DinJ Location: 2730774-2730900 bp Feature: domain Description: RelB_DinJ Location: 2730774-2730900 bp Feature: gene Location: 2730977-2731993 bp Feature: domain Description: FtsK_SpoIIIE Location: 2731634-2731874 bp Feature: domain Description: FtsK_SpoIIIE Location: 2731 634-2731 874 bp Feature: gene Location: 2732587-2734461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2732953-2733649 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2732953-2733649 bp Feature: domain Description: HNHc Note: nucleases Location: 2734189-2734348 bp Feature: domain Description: HNHc Note: nucleases Location: 27341 89-2734348 bp Feature: gene Location: 2734563-2734943 bp Feature: domain Description: FtsK Location: 2734578-2734818 bp Feature: domain Description: FtsK Location: 2734578-273481 8 bp Feature: gene Location: 2734988-2736130 bp Feature: domain Description: Dcm Location: 2734991-2736104 bp Feature: domain Description: Dcm Location: 2734991 -27361 04 bp Feature: gene Location: 2736665-2737849 bp Feature: domain Description: HTH_XRE Location: 2736695-2736839 bp Feature: domain Description: HTH_XRE Location: 2736695-2736839 bp Feature: domain Description: Rol_Rep_N Location: 2736872-2737136 bp Feature: domain Description: Rol_Rep_N Location: 2736872-27371 36 bp Feature: domain Description: Rep_trans Location: 2737160-2737772 bp Feature: domain Description: Rep_trans Location: 27371 60-2737772 bp Feature: gene Location: 2738729-2740639 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2739062-2739800 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2739062-2739800 bp Feature: domain Description: HNHc Note: nucleases Location: 2740355-2740520 bp Feature: domain Description: HNHc Note: nucleases Location: 2740355-2740520 bp Feature: gene Location: 2740827-2740967 bp Feature: gene Location: 2740980-2741483 bp Feature: domain Description: ArdA Location: 2740998-2741469 bp Feature: domain Description: ArdA Location: 2740998-2741 469 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06019 (phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed), Adenylsuccinate_lyase_1 (cd01360), RVT-GII, GIIM (pfam08388), PRK09362 (phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed), ArdA (pfam07275), HNHc (smart00507), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)
RelB_DinJ (TIGR02384), FtsK_SpoIIIE (pfam01580), FtsK (COG1674), Dcm (COG0270)