myRT

myRT report for GCA_900639555.1_E8172_hybrid_assembly

Download annotations/find similar RTs

Seq: LR135372.1 Enterococcus faecium isolate E8172 genome assembly, chromosome: 1 (2682742 bp)
Overview 1 RT 1: 245464-251855 bp Neighborhood of RT #1 [245464, 251869] FtsK HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA Feature: gene Location: 245464-246849 bp Feature: domain Description: FtsK Location: 246073-246706 bp Feature: domain Description: FtsK Location: 246073-246706 bp Feature: gene Location: 247028-248233 bp Feature: domain Description: HTH_XRE Location: 247073-247217 bp Feature: domain Description: HTH_XRE Location: 247073-24721 7 bp Feature: domain Description: Rol_Rep_N Location: 247244-247511 bp Feature: domain Description: Rol_Rep_N Location: 247244-24751 1 bp Feature: domain Description: Rep_trans Location: 247535-248144 bp Feature: domain Description: Rep_trans Location: 247535-2481 44 bp Feature: gene Location: 249017-250927 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 249350-250088 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 249350-250088 bp Feature: domain Description: HNHc Note: nucleases Location: 250643-250808 bp Feature: domain Description: HNHc Note: nucleases Location: 250643-250808 bp Feature: gene Location: 251088-251255 bp Feature: gene Location: 251372-251869 bp Feature: domain Description: ArdA Location: 251390-251855 bp Feature: domain Description: ArdA Location: 251 390-251 855 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FtsK (COG1674), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), RVT-GII, HNHc (smart00507), ArdA (pfam07275)

Seq: LR135373.1 Enterococcus faecium isolate E8172 genome assembly, plasmid: 2 (156371 bp)
Overview 1 RT 1: 13534-23329 bp Neighborhood of RT #1 [13534, 23329] VirD4 VirD4 RVT-GII HNH_4 TraG-D_C Feature: gene Location: 13534-15597 bp Feature: gene Location: 15597-17426 bp Feature: domain Description: VirD4 Location: 16008-16851 bp Feature: domain Description: VirD4 Location: 16008-16851 bp Feature: domain Description: VirD4 Location: 17238-17400 bp Feature: domain Description: VirD4 Location: 172 38-17400 bp Feature: gene Location: 18121-20037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18460-19195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18460-19195 bp Feature: domain Description: HNH_4 Location: 19789-19894 bp Feature: domain Description: HNH_4 Location: 19789-19894 bp Feature: gene Location: 20163-20954 bp Feature: domain Description: TraG-D_C Location: 20166-20472 bp Feature: domain Description: TraG-D_C Location: 2 0166-2 0472 bp Feature: gene Location: 20951-23329 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirD4 (COG3505), RVT-GII, HNH_4 (pfam13395), TraG-D_C (pfam12696)