myRT

myRT report for GCA_900639565.1_E8195_hybrid_assembly

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Seq: LR135364.1 Enterococcus faecium isolate E8195 genome assembly, chromosome: 1 (2833517 bp)
Overview 1 RT 1: 1184140-1189989 bp 2 RT 2: 1771366-1776104 bp 3 RT 3: 2673248-2684153 bp Neighborhood of RT #1 [1184140, 1190012] PRK06019 Adenylsuccinate_lyase_1 RVT-GII GIIM PRK09362 Neighborhood of RT #2 [1771366, 1776181] ArdA RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans Neighborhood of RT #3 [2673248, 2684167] RelB_DinJ FtsK_SpoIIIE RVT-GII HNHc FtsK Dcm HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA Feature: gene Location: 1184140-1185264 bp Feature: domain Description: PRK06019 Location: 1184164-1185253 bp Feature: domain Description: PRK0601 9 Location: 1 1 841 64-1 1 85253 bp Feature: gene Location: 1185277-1186572 bp Feature: domain Description: Adenylsuccinate_lyase_1 Location: 1185289-1186558 bp Feature: domain Description: Adenylsuccinate_lyase_1 Location: 1 1 85289-1 1 86558 bp Feature: gene Location: 1186694-1188082 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1187015-1187630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 8701 5-1 1 87630 bp Feature: domain Description: GIIM Note: maturase Location: 1187687-1187903 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 87687-1 1 87903 bp Feature: gene Location: 1188651-1189028 bp Feature: gene Location: 1189284-1190012 bp Feature: domain Description: PRK09362 Location: 1189287-1189989 bp Feature: domain Description: PRK09362 Location: 1 1 89287-1 1 89989 bp Feature: gene Location: 1771366-1771866 bp Feature: domain Description: ArdA Location: 1771384-1771855 bp Feature: domain Description: ArdA Location: 1 771 384-1 771 855 bp Feature: gene Location: 1771879-1772031 bp Feature: gene Location: 1772207-1774117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1772540-1773278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 772540-1 773278 bp Feature: domain Description: HNHc Note: nucleases Location: 1773833-1773998 bp Feature: domain Description: HNHc Note: nucleases Location: 1 773833-1 773998 bp Feature: gene Location: 1774626-1774775 bp Feature: gene Location: 1774997-1776181 bp Feature: domain Description: HTH_XRE Location: 1775027-1775171 bp Feature: domain Description: HTH_XRE Location: 1 775027-1 7751 71 bp Feature: domain Description: Rol_Rep_N Location: 1775204-1775468 bp Feature: domain Description: Rol_Rep_N Location: 1 775204-1 775468 bp Feature: domain Description: Rep_trans Location: 1775492-1776104 bp Feature: domain Description: Rep_trans Location: 1 775492-1 7761 04 bp Feature: gene Location: 2673248-2673592 bp Feature: domain Description: RelB_DinJ Location: 2673458-2673584 bp Feature: domain Description: RelB_DinJ Location: 2673458-2673584 bp Feature: gene Location: 2673661-2674677 bp Feature: domain Description: FtsK_SpoIIIE Location: 2674318-2674558 bp Feature: domain Description: FtsK_SpoIIIE Location: 267431 8-2674558 bp Feature: gene Location: 2675271-2677145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2675637-2676333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2675637-2676333 bp Feature: domain Description: HNHc Note: nucleases Location: 2676873-2677032 bp Feature: domain Description: HNHc Note: nucleases Location: 2676873-2677032 bp Feature: gene Location: 2677247-2677627 bp Feature: domain Description: FtsK Location: 2677262-2677502 bp Feature: domain Description: FtsK Location: 2677262-2677502 bp Feature: gene Location: 2677672-2678814 bp Feature: domain Description: Dcm Location: 2677675-2678788 bp Feature: domain Description: Dcm Location: 2677675-2678788 bp Feature: gene Location: 2679349-2680533 bp Feature: domain Description: HTH_XRE Location: 2679379-2679523 bp Feature: domain Description: HTH_XRE Location: 2679379-2679523 bp Feature: domain Description: Rol_Rep_N Location: 2679556-2679820 bp Feature: domain Description: Rol_Rep_N Location: 2679556-2679820 bp Feature: domain Description: Rep_trans Location: 2679844-2680456 bp Feature: domain Description: Rep_trans Location: 2679844-2680456 bp Feature: gene Location: 2681413-2683323 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2681746-2682484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2681 746-2682484 bp Feature: domain Description: HNHc Note: nucleases Location: 2683039-2683204 bp Feature: domain Description: HNHc Note: nucleases Location: 2683039-2683204 bp Feature: gene Location: 2683511-2683651 bp Feature: gene Location: 2683664-2684167 bp Feature: domain Description: ArdA Location: 2683682-2684153 bp Feature: domain Description: ArdA Location: 2683682-26841 53 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06019 (phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed), Adenylsuccinate_lyase_1 (cd01360), RVT-GII, GIIM (pfam08388), PRK09362 (phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed), ArdA (pfam07275), HNHc (smart00507), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)
RelB_DinJ (TIGR02384), FtsK_SpoIIIE (pfam01580), FtsK (COG1674), Dcm (COG0270)