myRT

myRT report for GCA_900639715.1_E8414_hybrid_assembly

Download annotations/find similar RTs

Seq: LR135488.1 Enterococcus faecium isolate E8414 genome assembly, chromosome: 1 (3004008 bp)
Overview 1 RT 1: 1237673-1243522 bp 2 RT 2: 1953945-1960411 bp 3 RT 3: 2878907-2883947 bp Neighborhood of RT #1 [1237673, 1243545] PRK06019 Adenylsuccinate_lyase_1 RVT-GII GIIM PRK09362 Neighborhood of RT #2 [1953945, 1960437] ArdA RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans Dcm Neighborhood of RT #3 [2878907, 2883961] HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA Feature: gene Location: 1237673-1238797 bp Feature: domain Description: PRK06019 Location: 1237697-1238786 bp Feature: domain Description: PRK0601 9 Location: 1 237697-1 238786 bp Feature: gene Location: 1238810-1240105 bp Feature: domain Description: Adenylsuccinate_lyase_1 Location: 1238822-1240091 bp Feature: domain Description: Adenylsuccinate_lyase_1 Location: 1 238822-1 240091 bp Feature: gene Location: 1240227-1241615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1240548-1241163 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 240548-1 241 1 63 bp Feature: domain Description: GIIM Note: maturase Location: 1241220-1241436 bp Feature: domain Description: GIIM Note: maturase Location: 1 241 220-1 241 436 bp Feature: gene Location: 1242184-1242561 bp Feature: gene Location: 1242817-1243545 bp Feature: domain Description: PRK09362 Location: 1242820-1243522 bp Feature: domain Description: PRK09362 Location: 1 242820-1 243522 bp Feature: gene Location: 1953945-1954445 bp Feature: domain Description: ArdA Location: 1953963-1954434 bp Feature: domain Description: ArdA Location: 1 953963-1 954434 bp Feature: gene Location: 1954458-1954610 bp Feature: gene Location: 1954786-1956696 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1955119-1955857 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9551 1 9-1 955857 bp Feature: domain Description: HNHc Note: nucleases Location: 1956412-1956577 bp Feature: domain Description: HNHc Note: nucleases Location: 1 95641 2-1 956577 bp Feature: gene Location: 1957576-1958760 bp Feature: domain Description: HTH_XRE Location: 1957606-1957750 bp Feature: domain Description: HTH_XRE Location: 1 957606-1 957750 bp Feature: domain Description: Rol_Rep_N Location: 1957783-1958047 bp Feature: domain Description: Rol_Rep_N Location: 1 957783-1 958047 bp Feature: domain Description: Rep_trans Location: 1958071-1958683 bp Feature: domain Description: Rep_trans Location: 1 958071 -1 958683 bp Feature: gene Location: 1959295-1960437 bp Feature: domain Description: Dcm Location: 1959298-1960411 bp Feature: domain Description: Dcm Location: 1 959298-1 96041 1 bp Feature: gene Location: 2878907-2879050 bp Feature: gene Location: 2879143-2880327 bp Feature: domain Description: HTH_XRE Location: 2879173-2879317 bp Feature: domain Description: HTH_XRE Location: 28791 73-287931 7 bp Feature: domain Description: Rol_Rep_N Location: 2879350-2879614 bp Feature: domain Description: Rol_Rep_N Location: 2879350-287961 4 bp Feature: domain Description: Rep_trans Location: 2879638-2880250 bp Feature: domain Description: Rep_trans Location: 2879638-2880250 bp Feature: gene Location: 2881207-2883117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2881540-2882278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2881 540-2882278 bp Feature: domain Description: HNHc Note: nucleases Location: 2882833-2882998 bp Feature: domain Description: HNHc Note: nucleases Location: 2882833-2882998 bp Feature: gene Location: 2883305-2883445 bp Feature: gene Location: 2883458-2883961 bp Feature: domain Description: ArdA Location: 2883476-2883947 bp Feature: domain Description: ArdA Location: 2883476-2883947 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06019 (phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed), Adenylsuccinate_lyase_1 (cd01360), RVT-GII, GIIM (pfam08388), PRK09362 (phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed), ArdA (pfam07275), HNHc (smart00507), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)
Dcm (COG0270)