myRT

myRT report for GCA_900639745.1_E4456_hybrid_assembly

Download annotations/find similar RTs

Seq: LR135482.1 Enterococcus faecium isolate E4456 genome assembly, chromosome: 1 (2640999 bp)
Overview 1 RT 1: 1740778-1745516 bp Neighborhood of RT #1 [1740778, 1745593] ArdA RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans Feature: gene Location: 1740778-1741278 bp Feature: domain Description: ArdA Location: 1740796-1741267 bp Feature: domain Description: ArdA Location: 1 740796-1 741 267 bp Feature: gene Location: 1741291-1741443 bp Feature: gene Location: 1741619-1743529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1741952-1742690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 741 952-1 742690 bp Feature: domain Description: HNHc Note: nucleases Location: 1743245-1743410 bp Feature: domain Description: HNHc Note: nucleases Location: 1 743245-1 74341 0 bp Feature: gene Location: 1744038-1744187 bp Feature: gene Location: 1744409-1745593 bp Feature: domain Description: HTH_XRE Location: 1744439-1744583 bp Feature: domain Description: HTH_XRE Location: 1 744439-1 744583 bp Feature: domain Description: Rol_Rep_N Location: 1744616-1744880 bp Feature: domain Description: Rol_Rep_N Location: 1 74461 6-1 744880 bp Feature: domain Description: Rep_trans Location: 1744904-1745516 bp Feature: domain Description: Rep_trans Location: 1 744904-1 74551 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdA (pfam07275), RVT-GII, HNHc (smart00507), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)

Seq: LR135484.1 Enterococcus faecium isolate E4456 genome assembly, plasmid: 3 (58698 bp)
Overview 1 RT 1: 26910-33171 bp Neighborhood of RT #1 [26910, 33314] ArdA RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans FtsK Feature: gene Location: 26910-27407 bp Feature: domain Description: ArdA Location: 26928-27393 bp Feature: domain Description: ArdA Location: 2 692 8-2 7393 bp Feature: gene Location: 27524-27691 bp Feature: gene Location: 27852-29762 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28185-28923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 8185-2 892 3 bp Feature: domain Description: HNHc Note: nucleases Location: 29478-29643 bp Feature: domain Description: HNHc Note: nucleases Location: 2 9478-2 9643 bp Feature: gene Location: 30546-31751 bp Feature: domain Description: HTH_XRE Location: 30591-30735 bp Feature: domain Description: HTH_XRE Location: 30591-30735 bp Feature: domain Description: Rol_Rep_N Location: 30762-31029 bp Feature: domain Description: Rol_Rep_N Location: 30762 -3102 9 bp Feature: domain Description: Rep_trans Location: 31053-31662 bp Feature: domain Description: Rep_trans Location: 31053-31662 bp Feature: gene Location: 31929-33314 bp Feature: domain Description: FtsK Location: 32538-33171 bp Feature: domain Description: FtsK Location: 32 538-33171 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdA (pfam07275), RVT-GII, HNHc (smart00507), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), FtsK (COG1674)