myRT

myRT report for GCA_900683745.1_Paraprevotella_xylaniphila_82A6

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Seq: LR215980.1 Paraprevotella xylaniphila YIT 11841 isolate Paraprevotella xylaniphila 82A6 genome assembly, chromosome: 1 (4125322 bp)
Overview 1 RT 1: 202890-208249 bp 2 RT 2: 927145-930765 bp 3 RT 3: 1546768-1550607 bp 4 RT 4: 3499196-3503127 bp Neighborhood of RT #1 [202890, 208249] HAD_PPase COG3547 COG3547 RVT-CRISPR-like Neighborhood of RT #2 [927145, 930776] RVT-GII PRK05347 Neighborhood of RT #3 [1546768, 1550607] TraG-D_C RVT_N RVT-GII GIIM Neighborhood of RT #4 [3499196, 3503127] RVT-UG27 Feature: gene Location: 202890-203543 bp Feature: domain Description: HAD_PPase Location: 202905-203532 bp Feature: domain Description: HAD_PPase Location: 202905-203532 bp Feature: gene Location: 204173-205324 bp Feature: domain Description: COG3547 Location: 204185-204527 bp Feature: domain Description: COG3547 Location: 2041 85-204527 bp Feature: domain Description: COG3547 Location: 204803-205259 bp Feature: domain Description: COG3547 Location: 204803-205259 bp Feature: gene Location: 205641-206771 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 205752-206415 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 205752-20641 5 bp Feature: gene Location: 206956-208266 bp Feature: gene Location: 208109-208249 bp Feature: gene Location: 927145-927498 bp Feature: gene Location: 927525-927710 bp Feature: gene Location: 928035-928415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 928038-928269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 928038-928269 bp Feature: gene Location: 928634-928822 bp Feature: gene Location: 929073-930776 bp Feature: domain Description: PRK05347 Location: 929097-930765 bp Feature: domain Description: PRK05347 Location: 929097-930765 bp Feature: gene Location: 1546768-1547193 bp Feature: gene Location: 1547279-1548484 bp Feature: domain Description: TraG-D_C Location: 1547861-1548194 bp Feature: domain Description: TraG-D_C Location: 1 547861 -1 5481 94 bp Feature: gene Location: 1548489-1550141 bp Feature: domain Description: RVT_N Location: 1548543-1548786 bp Feature: domain Description: RVT_N Location: 1 548543-1 548786 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1548831-1549479 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 548831 -1 549479 bp Feature: domain Description: GIIM Note: maturase Location: 1549533-1549764 bp Feature: domain Description: GIIM Note: maturase Location: 1 549533-1 549764 bp Feature: gene Location: 1550248-1550412 bp Feature: gene Location: 1550458-1550607 bp Feature: gene Location: 3499196-3499843 bp Feature: gene Location: 3499857-3500525 bp Feature: gene Location: 3500518-3501780 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 3500710-3501346 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 350071 0-3501 346 bp Feature: gene Location: 3502101-3502598 bp Feature: gene Location: 3502648-3503127 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HAD_PPase (cd07509), COG3547 (Transposase ), RVT-CRISPR, RVT-GII, PRK05347 (glutaminyl-tRNA synthetase; Provisional), TraG-D_C (pfam12696), RVT_N (pfam13655), GIIM (pfam08388), RVT-UG27