myRT

myRT report for GCA_900692665.1_12290_3_44-2

Download annotations/find similar RTs

Seq: LR216023.1 Streptococcus pneumoniae strain 2245STDY5699475 genome assembly, chromosome: 1 (2104636 bp)
Overview 1 RT 1: 565153-570947 bp 2 RT 2: 2040698-2046123 bp Neighborhood of RT #1 [565153, 570949] PRK10549 BaeS PRK07315 RVT-GII RVT-GII GIIM GIIM COG4097 Neighborhood of RT #2 [2040698, 2046128] MFS_MefA_like GIIM RVT-GII GIIM GlpF Feature: gene Location: 565153-566481 bp Ori: VFH57775.1 Gene: vncS Feature: domain Description: PRK10549 Location: 565159-565336 bp Feature: domain Description: PRK1 0549 Location: 5651 59-565336 bp Feature: domain Description: BaeS Location: 565483-566398 bp Feature: domain Description: BaeS Location: 565483-566398 bp Feature: gene Location: 566622-567503 bp Ori: VFH57780.1 Gene: fbaA Feature: domain Description: PRK07315 Location: 566625-567501 bp Feature: domain Description: PRK0731 5 Location: 566625-567501 bp Feature: gene Location: 568414-568695 bp Ori: VFH57784.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 568618-568690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56861 8-568690 bp Feature: gene Location: 568699-569421 bp Ori: VFH57789.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 568702-569233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 568702-569233 bp Feature: domain Description: GIIM Note: maturase Location: 569287-569416 bp Feature: domain Description: GIIM Note: maturase Location: 569287-56941 6 bp Feature: gene Location: 569382-569690 bp Ori: VFH57794.1 Feature: domain Description: GIIM Note: maturase Location: 569409-569499 bp Feature: domain Description: GIIM Note: maturase Location: 569409-569499 bp Feature: gene Location: 569759-570949 bp Ori: VFH57799.1 Gene: ndoR Feature: domain Description: COG4097 Location: 569777-570947 bp Feature: domain Description: COG4097 Location: 569777-570947 bp Feature: gene Location: 2040698-2041408 bp Ori: VFH67216.1 Feature: domain Description: MFS_MefA_like Location: 2040713-2041343 bp Feature: domain Description: MFS_MefA_like Location: 204071 3-2041 343 bp Feature: gene Location: 2041860-2042168 bp Ori: VFH67223.1 Feature: domain Description: GIIM Note: maturase Location: 2041887-2041977 bp Feature: domain Description: GIIM Note: maturase Location: 2041 887-2041 977 bp Feature: gene Location: 2042129-2043136 bp Ori: VFH67226.1 Gene: ltrA_3 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2042333-2042948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2042333-2042948 bp Feature: domain Description: GIIM Note: maturase Location: 2043002-2043131 bp Feature: domain Description: GIIM Note: maturase Location: 2043002-20431 31 bp Feature: gene Location: 2044250-2044837 bp Feature: gene Location: 2045424-2046128 bp Ori: VFH67241.1 Gene: glpF Feature: domain Description: GlpF Location: 2045427-2046123 bp Feature: domain Description: GlpF Location: 2045427-20461 23 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10549 (two-component system sensor histidine kinase BaeS), BaeS (COG0642), PRK07315 (fructose-bisphosphate aldolase; Provisional), RVT-GII, GIIM (pfam08388), COG4097 (Predicted ferric reductase ), MFS_MefA_like (cd06173), GlpF (COG0580)