myRT

myRT report for GCA_900699165.1_39282_E01-4

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Seq: LR217818.1 Escherichia coli strain NCTC86 genome assembly, chromosome: 1 (5102517 bp)
Overview 1 RT 1: 1343179-1345973 bp 2 RT 2: 4591944-4597281 bp Neighborhood of RT #1 [1343179, 1346218] QdoI PHA02517 RVT-GII GIIM Neighborhood of RT #2 [4591944, 4597289] PFLE_PFLC RVT-GII RVT-GII GIIM YesM Feature: gene Location: 1343179-1343529 bp Ori: VFQ34635.1 Feature: domain Description: QdoI Location: 1343245-1343497 bp Feature: domain Description: QdoI Location: 1 343245-1 343497 bp Feature: gene Location: 1344132-1344503 bp Ori: VFQ34636.1 Feature: domain Description: PHA02517 Location: 1344135-1344501 bp Feature: domain Description: PHA0251 7 Location: 1 3441 35-1 344501 bp Feature: gene Location: 1344695-1346218 bp Ori: VFQ34637.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1344968-1345700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 344968-1 345700 bp Feature: domain Description: GIIM Note: maturase Location: 1345775-1345973 bp Feature: domain Description: GIIM Note: maturase Location: 1 345775-1 345973 bp Feature: gene Location: 4591944-4592861 bp Ori: VFQ39880.1 Gene: hpdA Feature: domain Description: PFLE_PFLC Location: 4591980-4592835 bp Feature: domain Description: PFLE_PFLC Location: 4591 980-4592835 bp Feature: gene Location: 4592998-4593903 bp Feature: gene Location: 4594389-4594928 bp Ori: VFQ39884.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4594719-4594797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 459471 9-4594797 bp Feature: gene Location: 4594995-4595477 bp Ori: VFQ39886.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4595004-4595244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4595004-4595244 bp Feature: domain Description: GIIM Note: maturase Location: 4595292-4595472 bp Feature: domain Description: GIIM Note: maturase Location: 4595292-4595472 bp Feature: gene Location: 4595799-4595987 bp Feature: gene Location: 4596060-4597289 bp Ori: VFQ39890.1 Gene: ypdA_2 Feature: domain Description: YesM Location: 4596540-4597281 bp Feature: domain Description: YesM Location: 4596540-4597281 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT QdoI (COG1917), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PFLE_PFLC (TIGR02494), YesM (COG2972)