myRT

myRT report for GCA_901421925.1_38656_F01

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Seq: LR588408.1 Klebsiella pneumoniae strain NCTC11698 genome assembly, chromosome: 1 (5261751 bp)
Overview 1 RT 1: 89534-95003 bp 2 RT 2: 726742-735318 bp Neighborhood of RT #1 [89534, 95008] SymE_toxin RVT-Retrons PRK11462 Neighborhood of RT #2 [726742, 735323] FimC FimD RVT-UG4 PRK09692 YqgA Feature: gene Location: 89534-89821 bp Ori: VTO10748.1 Gene: symE_1 Feature: domain Description: SymE_toxin Location: 89582-89726 bp Feature: domain Description: SymE_toxin Location: 89582-89726 bp Feature: gene Location: 90135-90593 bp Feature: gene Location: 90829-91779 bp Ori: VTO10752.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 90928-91519 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 90928-91 51 9 bp Feature: gene Location: 91766-92275 bp Feature: gene Location: 93761-95008 bp Ori: VTO10757.1 Gene: yicJ_1 Feature: domain Description: PRK11462 Location: 93764-95003 bp Feature: domain Description: PRK1 1 462 Location: 93764-95003 bp Feature: gene Location: 726742-727452 bp Ori: VTO12542.1 Gene: fimC_2 Feature: domain Description: FimC Location: 726796-727435 bp Feature: domain Description: FimC Location: 726796-727435 bp Feature: gene Location: 727499-730093 bp Ori: VTO12545.1 Gene: fim_3 Feature: domain Description: FimD Location: 727541-730082 bp Feature: domain Description: FimD Location: 727541 -730082 bp Feature: gene Location: 730090-732171 bp Ori: VTO12548.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 730501-730945 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 730501 -730945 bp Feature: gene Location: 732929-733792 bp Ori: VTO12551.1 Gene: intA_1 Feature: domain Description: PRK09692 Location: 732953-733790 bp Feature: domain Description: PRK09692 Location: 732953-733790 bp Feature: gene Location: 734610-735323 bp Ori: VTO12554.1 Feature: domain Description: YqgA Location: 734616-735318 bp Feature: domain Description: YqgA Location: 73461 6-73531 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SymE_toxin (pfam08845), RVT-Retrons, PRK11462 (putative transporter; Provisional), FimC (COG3121), FimD (COG3188), RVT-UG4, PRK09692 (Integrase; provisional), YqgA (COG1811)