myRT

myRT report for GCA_901472495.1_32868_C01

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Seq: LR590469.1 Yersinia enterocolitica subsp. enterocolitica strain NCTC12982 genome assembly, chromosome: 1 (4558409 bp)
Overview 1 RT 1: 1910209-1915483 bp 2 RT 2: 2207995-2212936 bp Neighborhood of RT #1 [1910209, 1915671] FocA PRK09692 RVT-UG17 SLATT_5 Ogr_Delta Neighborhood of RT #2 [2207995, 2213022] AlpA PRK09692 RVT-Retrons PRK09678 Feature: gene Location: 1910209-1911120 bp Ori: VTP80618.1 Gene: yfdC Feature: domain Description: FocA Location: 1910299-1911067 bp Feature: domain Description: FocA Location: 1 91 0299-1 91 1 067 bp Feature: gene Location: 1911530-1912711 bp Ori: VTP80622.1 Gene: intS_2 Feature: domain Description: PRK09692 Location: 1911539-1912688 bp Feature: domain Description: PRK09692 Location: 1 91 1 539-1 91 2688 bp Feature: gene Location: 1912708-1914042 bp Ori: VTP80626.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1912936-1913539 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 91 2936-1 91 3539 bp Feature: gene Location: 1914020-1914604 bp Ori: VTP80630.1 Feature: domain Description: SLATT_5 Location: 1914035-1914566 bp Feature: domain Description: SLATT_5 Location: 1 91 4035-1 91 4566 bp Feature: gene Location: 1915324-1915671 bp Ori: VTP80634.1 Feature: domain Description: Ogr_Delta Location: 1915348-1915483 bp Feature: domain Description: Ogr_Delta Location: 1 91 5348-1 91 5483 bp Feature: gene Location: 2207995-2208198 bp Ori: VTP81674.1 Feature: domain Description: AlpA Location: 2208004-2208181 bp Feature: domain Description: AlpA Location: 2208004-22081 81 bp Feature: gene Location: 2208929-2210125 bp Ori: VTP81678.1 Gene: intA1 Feature: domain Description: PRK09692 Location: 2208932-2210105 bp Feature: domain Description: PRK09692 Location: 2208932-221 01 05 bp Feature: gene Location: 2210455-2211678 bp Ori: VTP81682.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2210605-2211223 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 221 0605-221 1 223 bp Feature: gene Location: 2211696-2212448 bp Feature: gene Location: 2212777-2213022 bp Ori: VTP81690.1 Feature: domain Description: PRK09678 Location: 2212780-2212936 bp Feature: domain Description: PRK09678 Location: 221 2780-221 2936 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FocA (COG2116), PRK09692 (Integrase; provisional), RVT-UG17, SLATT_5 (pfam18160), Ogr_Delta (pfam04606), AlpA (COG3311), RVT-Retrons, PRK09678 (DNA-binding transcriptional regulator; Provisional)