myRT

myRT report for GCA_901472575.1_37277_G01

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Seq: LR590471.1 Streptococcus equi subsp. zooepidemicus strain NCTC11854 genome assembly, chromosome: 1 (2177900 bp)
Overview 1 RT 1: 264902-269609 bp 2 RT 2: 1890773-1899547 bp 3 RT 3: 1907020-1917599 bp 4 RT 4: 1927419-1933031 bp Neighborhood of RT #1 [264902, 269611] MobC Relaxase RVT-GII Intron_maturas2 Relaxase YozG Neighborhood of RT #2 [1890773, 1899567] PrgI VirB4_CagE RVT_N RVT-GII GIIM Peptidase_M23 Phage_lysozyme2 PRK08581 PBECR4 Neighborhood of RT #3 [1907020, 1917599] N6_Mtase COG4646 RVT-GII Intron_maturas2 Neighborhood of RT #4 [1927419, 1933216] MobC Relaxase RVT-GII Intron_maturas2 VirD2 Streptin-Immun SR_ResInv Feature: gene Location: 264902-265282 bp Ori: VTP86758.1 Feature: domain Description: MobC Location: 265124-265211 bp Feature: domain Description: MobC Location: 2651 24-26521 1 bp Feature: gene Location: 265282-265644 bp Ori: VTP86764.1 Feature: domain Description: Relaxase Location: 265312-265609 bp Feature: domain Description: Relaxase Location: 26531 2-265609 bp Feature: gene Location: 266181-267983 bp Ori: VTP86770.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 266457-267261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 266457-267261 bp Feature: domain Description: Intron_maturas2 Location: 267345-267648 bp Feature: domain Description: Intron_maturas2 Location: 267345-267648 bp Feature: gene Location: 268128-269237 bp Ori: VTP86776.1 Feature: domain Description: Relaxase Location: 268137-268524 bp Feature: domain Description: Relaxase Location: 2681 37-268524 bp Feature: gene Location: 269402-269611 bp Ori: VTP86781.1 Gene: vanUG2 Feature: domain Description: YozG Location: 269417-269609 bp Feature: domain Description: YozG Location: 26941 7-269609 bp Feature: gene Location: 1890773-1891126 bp Ori: VTP93773.1 Feature: domain Description: PrgI Location: 1890785-1891043 bp Feature: domain Description: PrgI Location: 1 890785-1 891 043 bp Feature: gene Location: 1891083-1892570 bp Ori: VTP93777.1 Feature: domain Description: VirB4_CagE Location: 1891659-1892298 bp Feature: domain Description: VirB4_CagE Location: 1 891 659-1 892298 bp Feature: gene Location: 1893099-1894772 bp Ori: VTP93781.1 Gene: ltrA_2 Feature: domain Description: RVT_N Location: 1893171-1893411 bp Feature: domain Description: RVT_N Location: 1 8931 71 -1 89341 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1893459-1894119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 893459-1 8941 1 9 bp Feature: domain Description: GIIM Note: maturase Location: 1894188-1894407 bp Feature: domain Description: GIIM Note: maturase Location: 1 8941 88-1 894407 bp Feature: gene Location: 1895742-1898546 bp Ori: VTP93785.1 Feature: domain Description: Peptidase_M23 Location: 1897188-1897392 bp Feature: domain Description: Peptidase_M23 Location: 1 8971 88-1 897392 bp Feature: domain Description: Phage_lysozyme2 Location: 1897545-1898055 bp Feature: domain Description: Phage_lysozyme2 Location: 1 897545-1 898055 bp Feature: domain Description: PRK08581 Location: 1898172-1898505 bp Feature: domain Description: PRK08581 Location: 1 8981 72-1 898505 bp Feature: gene Location: 1898989-1899567 bp Ori: VTP93789.1 Feature: domain Description: PBECR4 Location: 1898995-1899547 bp Feature: domain Description: PBECR4 Location: 1 898995-1 899547 bp Feature: gene Location: 1907020-1907571 bp Feature: gene Location: 1907621-1913518 bp Ori: VTP93812.1 Feature: domain Description: N6_Mtase Location: 1909625-1910225 bp Feature: domain Description: N6_Mtase Location: 1 909625-1 91 0225 bp Feature: domain Description: COG4646 Location: 1910807-1913114 bp Feature: domain Description: COG4646 Location: 1 91 0807-1 91 31 1 4 bp Feature: gene Location: 1914082-1915893 bp Ori: VTP93816.1 Gene: ltrA_3 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1914346-1915168 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 91 4346-1 91 51 68 bp Feature: domain Description: Intron_maturas2 Location: 1915237-1915714 bp Feature: domain Description: Intron_maturas2 Location: 1 91 5237-1 91 571 4 bp Feature: gene Location: 1917015-1917314 bp Feature: gene Location: 1917330-1917599 bp Feature: gene Location: 1927419-1927784 bp Ori: VTP93882.1 Feature: domain Description: MobC Location: 1927605-1927731 bp Feature: domain Description: MobC Location: 1 927605-1 927731 bp Feature: gene Location: 1927771-1928199 bp Ori: VTP93886.1 Gene: ltrBE1 Feature: domain Description: Relaxase Location: 1927804-1928164 bp Feature: domain Description: Relaxase Location: 1 927804-1 9281 64 bp Feature: gene Location: 1928736-1930538 bp Ori: VTP93890.1 Gene: ltrA_4 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1929012-1929816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 92901 2-1 92981 6 bp Feature: domain Description: Intron_maturas2 Location: 1929900-1930203 bp Feature: domain Description: Intron_maturas2 Location: 1 929900-1 930203 bp Feature: gene Location: 1930719-1932131 bp Ori: VTP93894.1 Feature: domain Description: VirD2 Location: 1930722-1931355 bp Feature: domain Description: VirD2 Location: 1 930722-1 931 355 bp Feature: domain Description: Streptin-Immun Location: 1931814-1932090 bp Feature: domain Description: Streptin-Immun Location: 1 931 81 4-1 932090 bp Feature: gene Location: 1932617-1933216 bp Ori: VTP93898.1 Gene: bin3 Feature: domain Description: SR_ResInv Location: 1932623-1933031 bp Feature: domain Description: SR_ResInv Location: 1 932623-1 933031 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MobC (pfam05713), Relaxase (pfam03432), RVT-GII, Intron_maturas2 (pfam01348), YozG (COG3655), PrgI (pfam12666), VirB4_CagE (TIGR00929), RVT_N (pfam13655), GIIM (pfam08388), Peptidase_M23 (pfam01551)
Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein), PBECR4 (pfam18813), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), VirD2 (COG3843), Streptin-Immun (pfam11083), SR_ResInv (cd03768)