myRT

myRT report for GCA_901482695.1_45076_G02

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Seq: LR590484.1 Sphingobacterium thalpophilum strain NCTC11429 genome assembly, chromosome: 1 (5962893 bp)
Overview 1 RT 1: 3891343-3897983 bp 2 RT 2: 4973227-4977501 bp Neighborhood of RT #1 [3891343, 3897991] Bac_Flav_CT_J DUF4141 VirB5 RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G Neighborhood of RT #2 [4973227, 4977509] PHA02517 InsE RVT-UG2 WYL Feature: gene Location: 3891343-3892338 bp Ori: VTR46248.1 Feature: domain Description: Bac_Flav_CT_J Location: 3891349-3892315 bp Feature: domain Description: Bac_Flav_CT_J Location: 3891 349-389231 5 bp Feature: gene Location: 3892341-3892973 bp Ori: VTR46255.1 Feature: domain Description: DUF4141 Location: 3892359-3892512 bp Feature: domain Description: DUF41 41 Location: 3892359-389251 2 bp Feature: domain Description: VirB5 Location: 3892650-3892860 bp Feature: domain Description: VirB5 Location: 3892650-3892860 bp Feature: gene Location: 3893233-3895047 bp Ori: VTR46262.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3893497-3894319 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3893497-389431 9 bp Feature: domain Description: Intron_maturas2 Location: 3894454-3894670 bp Feature: domain Description: Intron_maturas2 Location: 3894454-3894670 bp Feature: domain Description: HNHc Note: nucleases Location: 3894847-3895018 bp Feature: domain Description: HNHc Note: nucleases Location: 3894847-389501 8 bp Feature: gene Location: 3895087-3895629 bp Feature: gene Location: 3895598-3897991 bp Ori: VTR46273.1 Gene: traC_4 Feature: domain Description: Bac_Flav_CT_G Location: 3895601-3897983 bp Feature: domain Description: Bac_Flav_CT_G Location: 3895601 -3897983 bp Feature: gene Location: 4973227-4973874 bp Ori: VTR51474.1 Feature: domain Description: PHA02517 Location: 4973230-4973866 bp Feature: domain Description: PHA0251 7 Location: 4973230-4973866 bp Feature: gene Location: 4973934-4974233 bp Ori: VTR51477.1 Feature: domain Description: InsE Location: 4973943-4974216 bp Feature: domain Description: InsE Location: 4973943-497421 6 bp Feature: gene Location: 4974300-4975862 bp Ori: VTR51480.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 4974546-4975467 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 4974546-4975467 bp Feature: gene Location: 4976005-4976214 bp Feature: gene Location: 4976304-4977509 bp Ori: VTR51486.1 Feature: domain Description: WYL Location: 4977309-4977501 bp Feature: domain Description: WYL Location: 4977309-4977501 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_J (TIGR03782), DUF4141 (pfam13605), VirB5 (TIGR02791), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Bac_Flav_CT_G (TIGR03783), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), RVT-UG2
WYL (pfam13280)