myRT

myRT report for GCA_901538355.1_ASM90153835v1

Download annotations/find similar RTs

Seq: LR593887.1 Tuwongella immobilis isolate MBLW1 genome assembly, chromosome: 1 (6690754 bp)
Overview 1 RT 1: 650417-654420 bp 2 RT 2: 4215422-4223169 bp 3 RT 3: 4365431-4371412 bp Neighborhood of RT #1 [650417, 654455] RVT-AbiP2 Acetyltransf_1 Neighborhood of RT #2 [4215422, 4223231] AAT RVT-Retrons UbiD N_methyl SBP_bac_10 Neighborhood of RT #3 [4365431, 4371412] CRISPR_Cas6 RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 650417-650665 bp Feature: gene Location: 650904-651353 bp Feature: gene Location: 652013-653521 bp Ori: VTR97631.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 652466-652922 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 652466-652922 bp Feature: gene Location: 653815-654003 bp Feature: gene Location: 654003-654455 bp Ori: VTR97635.1 Feature: domain Description: Acetyltransf_1 Location: 654150-654420 bp Feature: domain Description: Acetyltransf_1 Location: 6541 50-654420 bp Feature: gene Location: 4215422-4216312 bp Ori: VTS05101.1 Feature: domain Description: AAT Location: 4215689-4216280 bp Feature: domain Description: AAT Location: 421 5689-421 6280 bp Feature: gene Location: 4216600-4218306 bp Feature: gene Location: 4218597-4220195 bp Ori: VTS05105.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4219356-4219968 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 421 9356-421 9968 bp Feature: gene Location: 4220258-4222111 bp Ori: VTS05107.1 Feature: domain Description: UbiD Location: 4220261-4222076 bp Feature: domain Description: UbiD Location: 4220261 -4222076 bp Feature: gene Location: 4222200-4223231 bp Ori: VTS05109.1 Feature: domain Description: N_methyl Location: 4222218-4222290 bp Feature: domain Description: N_methyl Location: 422221 8-4222290 bp Feature: domain Description: SBP_bac_10 Location: 4222305-4223169 bp Feature: domain Description: SBP_bac_1 0 Location: 4222305-42231 69 bp Feature: gene Location: 4365431-4366030 bp Feature: gene Location: 4366050-4366319 bp Feature: gene Location: 4366726-4369482 bp Ori: VTS05371.1 Feature: domain Description: CRISPR_Cas6 Location: 4367185-4367545 bp Feature: domain Description: CRISPR_Cas6 Location: 43671 85-4367545 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 4367731-4368307 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 4367731 -4368307 bp Feature: domain Description: Cas1_I-II-III Location: 4368544-4369444 bp Feature: domain Description: Cas1 _I-II-III Location: 4368544-4369444 bp Feature: gene Location: 4369479-4369754 bp Ori: VTS05373.1 Feature: domain Description: Cas2_I_II_III Location: 4369491-4369683 bp Feature: domain Description: Cas2_I_II_III Location: 4369491 -4369683 bp Feature: gene Location: 4370696-4371412 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, Acetyltransf_1 (pfam00583), AAT (pfam03417), RVT-Retrons, UbiD (pfam01977), N_methyl (pfam07963), SBP_bac_10 (pfam07596), CRISPR_Cas6 (pfam10040), RVT-CRISPR, Cas1_I-II-III (cl00656)
Cas2_I_II_III (cl11442)