myRT

myRT report for GCA_901542435.1_41975_D01

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Seq: LR594035.1 Streptococcus porcinus strain NCTC5385 genome assembly, chromosome: 1 (2068418 bp)
Overview 1 RT 1: 1322713-1328165 bp Neighborhood of RT #1 [1322713, 1328269] PHA02517 RVT_N RVT-GII GIIM TraC-F-type PrgI Feature: gene Location: 1322713-1323087 bp Ori: VTS30533.1 Feature: domain Description: PHA02517 Location: 1322716-1323082 bp Feature: domain Description: PHA0251 7 Location: 1 32271 6-1 323082 bp Feature: gene Location: 1323101-1323247 bp Feature: gene Location: 1324216-1325889 bp Ori: VTS30570.1 Gene: ltrA Feature: domain Description: RVT_N Location: 1324288-1324528 bp Feature: domain Description: RVT_N Location: 1 324288-1 324528 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1324576-1325236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 324576-1 325236 bp Feature: domain Description: GIIM Note: maturase Location: 1325305-1325524 bp Feature: domain Description: GIIM Note: maturase Location: 1 325305-1 325524 bp Feature: gene Location: 1326418-1327932 bp Ori: VTS30588.1 Feature: domain Description: TraC-F-type Location: 1326889-1327897 bp Feature: domain Description: TraC-F-type Location: 1 326889-1 327897 bp Feature: gene Location: 1327880-1328269 bp Ori: VTS30606.1 Feature: domain Description: PrgI Location: 1327898-1328165 bp Feature: domain Description: PrgI Location: 1 327898-1 3281 65 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TraC-F-type (TIGR02746), PrgI (pfam12666)