myRT

myRT report for GCA_901543725.1_42731_A01

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Seq: LR594046.1 Streptococcus dysgalactiae strain NCTC6403 genome assembly, chromosome: 1 (2200497 bp)
Overview 1 RT 1: 573531-581893 bp 2 RT 2: 1095465-1105670 bp 3 RT 3: 1112795-1120502 bp Neighborhood of RT #1 [573531, 581893] PrgI VirB4_CagE RVT_N RVT-GII GIIM Peptidase_M23 Phage_lysozyme2 PRK08581 Neighborhood of RT #2 [1095465, 1105670] KOG1000 RVT-GII Intron_maturas2 HNHc N6_Mtase COG4646 Neighborhood of RT #3 [1112795, 1120570] PRK08581 Peptidase_M23 Phage_lysozyme2 RVT_N RVT-GII GIIM TraC-F-type PrgI Feature: gene Location: 573531-573890 bp Ori: VTS98971.1 Feature: domain Description: PrgI Location: 573564-573798 bp Feature: domain Description: PrgI Location: 573564-573798 bp Feature: gene Location: 573832-575346 bp Ori: VTS98978.1 Feature: domain Description: VirB4_CagE Location: 574249-575317 bp Feature: domain Description: VirB4_CagE Location: 574249-57531 7 bp Feature: gene Location: 575876-577549 bp Ori: VTS98985.1 Gene: ltrA_1 Feature: domain Description: RVT_N Location: 575948-576188 bp Feature: domain Description: RVT_N Location: 575948-5761 88 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 576236-576896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 576236-576896 bp Feature: domain Description: GIIM Note: maturase Location: 576965-577184 bp Feature: domain Description: GIIM Note: maturase Location: 576965-5771 84 bp Feature: gene Location: 578571-581267 bp Ori: VTS98992.1 Feature: domain Description: Peptidase_M23 Location: 579834-580053 bp Feature: domain Description: Peptidase_M23 Location: 579834-580053 bp Feature: domain Description: Phage_lysozyme2 Location: 580272-580791 bp Feature: domain Description: Phage_lysozyme2 Location: 580272-580791 bp Feature: domain Description: PRK08581 Location: 580902-581205 bp Feature: domain Description: PRK08581 Location: 580902-581 205 bp Feature: gene Location: 581291-581893 bp Feature: gene Location: 1095465-1095764 bp Feature: gene Location: 1095835-1097178 bp Ori: VTT02312.1 Feature: domain Description: KOG1000 Location: 1096114-1096429 bp Feature: domain Description: KOG1 000 Location: 1 0961 1 4-1 096429 bp Feature: gene Location: 1097316-1099094 bp Ori: VTT02320.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1097577-1098369 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 097577-1 098369 bp Feature: domain Description: Intron_maturas2 Location: 1098474-1098705 bp Feature: domain Description: Intron_maturas2 Location: 1 098474-1 098705 bp Feature: domain Description: HNHc Note: nucleases Location: 1098870-1099056 bp Feature: domain Description: HNHc Note: nucleases Location: 1 098870-1 099056 bp Feature: gene Location: 1099592-1105069 bp Ori: VTT02330.1 Feature: domain Description: N6_Mtase Location: 1101620-1102211 bp Feature: domain Description: N6_Mtase Location: 1 1 01 620-1 1 0221 1 bp Feature: domain Description: COG4646 Location: 1102811-1104926 bp Feature: domain Description: COG4646 Location: 1 1 0281 1 -1 1 04926 bp Feature: gene Location: 1105119-1105670 bp Feature: gene Location: 1112795-1113448 bp Ori: VTT02380.1 Feature: domain Description: PRK08581 Location: 1113074-1113413 bp Feature: domain Description: PRK08581 Location: 1 1 1 3074-1 1 1 341 3 bp Feature: gene Location: 1113458-1115596 bp Ori: VTT02388.1 Feature: domain Description: Peptidase_M23 Location: 1114901-1115114 bp Feature: domain Description: Peptidase_M23 Location: 1 1 1 4901 -1 1 1 51 1 4 bp Feature: domain Description: Phage_lysozyme2 Location: 1115255-1115588 bp Feature: domain Description: Phage_lysozyme2 Location: 1 1 1 5255-1 1 1 5588 bp Feature: gene Location: 1116565-1118238 bp Ori: VTT02396.1 Gene: ltrA_3 Feature: domain Description: RVT_N Location: 1116637-1116877 bp Feature: domain Description: RVT_N Location: 1 1 1 6637-1 1 1 6877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1116925-1117585 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 6925-1 1 1 7585 bp Feature: domain Description: GIIM Note: maturase Location: 1117654-1117873 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 1 7654-1 1 1 7873 bp Feature: gene Location: 1118767-1120260 bp Ori: VTT02404.1 Feature: domain Description: TraC-F-type Location: 1119133-1119946 bp Feature: domain Description: TraC-F-type Location: 1 1 1 91 33-1 1 1 9946 bp Feature: gene Location: 1120217-1120570 bp Ori: VTT02412.1 Feature: domain Description: PrgI Location: 1120229-1120502 bp Feature: domain Description: PrgI Location: 1 1 20229-1 1 20502 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PrgI (pfam12666), VirB4_CagE (TIGR00929), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Peptidase_M23 (pfam01551), Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), Intron_maturas2 (pfam01348)
HNHc (smart00507), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), TraC-F-type (TIGR02746)