myRT

myRT report for GCA_901846895.1_Variovorax_sp._WDL-1

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Seq: LR594692.1 Variovorax sp. WDL1 genome assembly, plasmid: 4 (207894 bp)
Overview 1 RT 1: 99761-109920 bp Neighborhood of RT #1 [99761, 109928] Tra8 PHA02517 RVT-GII GIIM PHA02517 InsE PBP2_Bug_TTT COG3547 RVT-GII CaiB MmgE_PrpD Feature: gene Location: 99761-100501 bp Ori: VTV19169.1 Feature: domain Description: Tra8 Location: 99764-100469 bp Feature: domain Description: Tra8 Location: 99764-1 00469 bp Feature: gene Location: 100449-100793 bp Ori: VTV19170.1 Feature: domain Description: PHA02517 Location: 100527-100737 bp Feature: domain Description: PHA0251 7 Location: 1 00527-1 00737 bp Feature: gene Location: 100786-102309 bp Ori: VTV19171.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101092-101854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 092-1 01 854 bp Feature: domain Description: GIIM Note: maturase Location: 101929-102157 bp Feature: domain Description: GIIM Note: maturase Location: 1 01 929-1 021 57 bp Feature: gene Location: 102495-103346 bp Ori: VTV19173.1 Feature: domain Description: PHA02517 Location: 102558-102909 bp Feature: domain Description: PHA0251 7 Location: 1 02558-1 02909 bp Feature: gene Location: 103343-103666 bp Ori: VTV19174.1 Feature: domain Description: InsE Location: 103349-103655 bp Feature: domain Description: InsE Location: 1 03349-1 03655 bp Feature: gene Location: 104777-105742 bp Ori: VTV19179.1 Feature: domain Description: PBP2_Bug_TTT Location: 104849-105719 bp Feature: domain Description: PBP2_Bug_TTT Location: 1 04849-1 0571 9 bp Feature: gene Location: 106042-107046 bp Ori: VTV19180.1 Feature: domain Description: COG3547 Location: 106054-106966 bp Feature: domain Description: COG3547 Location: 1 06054-1 06966 bp Feature: gene Location: 107600-109108 bp Ori: VTV19181.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108026-108716 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 08026-1 0871 6 bp Feature: gene Location: 109318-109653 bp Ori: VTV19182.1 Gene: frc_26 Feature: domain Description: CaiB Location: 109330-109606 bp Feature: domain Description: CaiB Location: 1 09330-1 09606 bp Feature: gene Location: 109650-109928 bp Ori: VTV19183.1 Feature: domain Description: MmgE_PrpD Location: 109671-109920 bp Feature: domain Description: MmgE_PrpD Location: 1 09671 -1 09920 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra8 (COG2826), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), PBP2_Bug_TTT (cd07012), COG3547 (Transposase ), CaiB (COG1804), MmgE_PrpD (pfam03972)