myRT

myRT report for GCA_902459475.1_pb_189-1_HGAP3_CTR

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Seq: LR699116.1 Aquicella lusitana strain SGT-39 genome assembly, plasmid: 3 (92205 bp)
Overview 1 RT 1: 5082-10390 bp Neighborhood of RT #1 [5082, 10392] parB_part RVT-GII GIIM HTH_1 PBP2_Nitroaromatics_like YwnB Feature: gene Location: 5082-6083 bp Ori: VVC74541.1 Gene: parB_4 Feature: domain Description: parB_part Location: 5274-5796 bp Feature: domain Description: parB_part Location: 5274-5796 bp Feature: gene Location: 6083-6430 bp Feature: gene Location: 7330-8583 bp Ori: VVC74543.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7534-8191 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7534-81 91 bp Feature: domain Description: GIIM Note: maturase Location: 8272-8479 bp Feature: domain Description: GIIM Note: maturase Location: 8272-8479 bp Feature: gene Location: 8751-9656 bp Ori: VVC74544.1 Gene: syrM1 Feature: domain Description: HTH_1 Location: 8784-8958 bp Feature: domain Description: HTH_1 Location: 8784-8958 bp Feature: domain Description: PBP2_Nitroaromatics_like Location: 9054-9642 bp Feature: domain Description: PBP2_Nitroaromatics_like Location: 9054-9642 bp Feature: gene Location: 9742-10392 bp Ori: VVC74545.1 Feature: domain Description: YwnB Location: 9745-10390 bp Feature: domain Description: YwnB Location: 9745-1 0390 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT parB_part (TIGR00180), RVT-GII, GIIM (pfam08388), HTH_1 (pfam00126), PBP2_Nitroaromatics_like (cd08417), YwnB (COG2910)

Seq: LR699117.1 Aquicella lusitana strain SGT-39 genome assembly, plasmid: 4 (76909 bp)
Overview 1 RT 1: 34118-39939 bp 2 RT 2: 67962-76326 bp Neighborhood of RT #1 [34118, 39980] LMWP_ArsC ACR3 RVT_N RVT-GII GIIM xerC Neighborhood of RT #2 [67962, 76655] AbiEii RVT-GII GIIM AbiEii AbiEi_3_N AbiEi_3 Rep_3 RVT-GII GIIM parB_part Feature: gene Location: 34118-34489 bp Ori: VVC74667.1 Gene: arsC Feature: domain Description: LMWP_ArsC Location: 34121-34460 bp Feature: domain Description: LMWP_ArsC Location: 3412 1-34460 bp Feature: gene Location: 34878-35513 bp Ori: VVC74668.1 Gene: acr3 Feature: domain Description: ACR3 Location: 34881-35508 bp Feature: domain Description: ACR3 Location: 34881-35508 bp Feature: gene Location: 36200-37759 bp Ori: VVC74669.1 Gene: ltrA_3 Feature: domain Description: RVT_N Location: 36257-36500 bp Feature: domain Description: RVT_N Location: 362 57-36500 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36551-37172 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36551-37172 bp Feature: domain Description: GIIM Note: maturase Location: 37223-37457 bp Feature: domain Description: GIIM Note: maturase Location: 372 2 3-37457 bp Feature: gene Location: 38087-38755 bp Feature: gene Location: 38778-39980 bp Ori: VVC74671.1 Gene: xerD_1 Feature: domain Description: xerC Location: 38970-39939 bp Feature: domain Description: xerC Location: 38970-39939 bp Feature: gene Location: 67962-68231 bp Feature: gene Location: 68261-69112 bp Ori: VVC74707.1 Feature: domain Description: AbiEii Location: 68330-68837 bp Feature: domain Description: AbiEii Location: 68330-68837 bp Feature: gene Location: 69109-70371 bp Ori: VVC74708.1 Gene: ltrA_4 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69310-69964 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69310-69964 bp Feature: domain Description: GIIM Note: maturase Location: 70048-70261 bp Feature: domain Description: GIIM Note: maturase Location: 70048-702 61 bp Feature: gene Location: 70899-71084 bp Ori: VVC74709.1 Feature: domain Description: AbiEii Location: 70941-71043 bp Feature: domain Description: AbiEii Location: 70941-71043 bp Feature: gene Location: 71085-71864 bp Ori: VVC74710.1 Feature: domain Description: AbiEi_3_N Location: 71103-71376 bp Feature: domain Description: AbiEi_3_N Location: 71103-71376 bp Feature: domain Description: AbiEi_3 Location: 71388-71847 bp Feature: domain Description: AbiEi_3 Location: 71388-71847 bp Feature: gene Location: 71979-73250 bp Ori: VVC74711.1 Feature: domain Description: Rep_3 Location: 72030-72681 bp Feature: domain Description: Rep_3 Location: 72 030-72 681 bp Feature: gene Location: 73381-74634 bp Ori: VVC74712.1 Gene: ltrA_5 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73585-74242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73585-742 42 bp Feature: domain Description: GIIM Note: maturase Location: 74323-74530 bp Feature: domain Description: GIIM Note: maturase Location: 7432 3-74530 bp Feature: gene Location: 75297-75632 bp Feature: gene Location: 75645-76655 bp Ori: VVC74714.1 Gene: parB_5 Feature: domain Description: parB_part Location: 75834-76326 bp Feature: domain Description: parB_part Location: 75834-7632 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LMWP_ArsC (cd16345), ACR3 (COG0798), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), xerC (PRK01287), AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), Rep_3 (pfam01051)
parB_part (TIGR00180)

Seq: LR699115.1 Aquicella lusitana strain SGT-39 genome assembly, chromosome: 2 (281037 bp)
Overview 1 RT 1: 684-5843 bp Neighborhood of RT #1 [684, 6211] Spo0J RVT-GII GIIM CarboxypepD_reg CarboxypepD_reg DUF2799 DUF2799 Feature: gene Location: 684-1697 bp Ori: VVC74267.1 Gene: parB_3 Feature: domain Description: Spo0J Location: 786-1455 bp Feature: domain Description: Spo0J Location: 786-1455 bp Feature: gene Location: 1694-2059 bp Feature: gene Location: 2826-4079 bp Ori: VVC74269.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3030-3687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 03 0-3 687 bp Feature: domain Description: GIIM Note: maturase Location: 3768-3975 bp Feature: domain Description: GIIM Note: maturase Location: 3 768-3 975 bp Feature: gene Location: 4270-5034 bp Ori: VVC74270.1 Feature: domain Description: CarboxypepD_reg Location: 4402-4576 bp Feature: domain Description: CarboxypepD_reg Location: 4402-4576 bp Feature: domain Description: CarboxypepD_reg Location: 4852-4948 bp Feature: domain Description: CarboxypepD_reg Location: 4852-4948 bp Feature: gene Location: 5372-6211 bp Ori: VVC74271.1 Feature: domain Description: DUF2799 Location: 5459-5615 bp Feature: domain Description: DUF2799 Location: 5459-5615 bp Feature: domain Description: DUF2799 Location: 5618-5843 bp Feature: domain Description: DUF2799 Location: 5618-5843 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Spo0J (COG1475), RVT-GII, GIIM (pfam08388), CarboxypepD_reg (pfam13620), DUF2799 (pfam10973)