myRT

myRT report for GCA_902702775.1_9401240

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Seq: LR738724.1 Streptococcus suis isolate 9401240 genome assembly, chromosome: 1 (2189829 bp)
Overview 1 RT 1: 773762-782620 bp 2 RT 2: 972358-981349 bp 3 RT 3: 987141-996431 bp Neighborhood of RT #1 [773762, 782620] VirB4 TraC-F-type Phage_lysozyme2 PRK08581 RVT-GII cas_Csn1 Neighborhood of RT #2 [972358, 981789] TraC-F-type Peptidase_M23 Phage_lysozyme2 PRK08581 RVT-GII cas_Csn1 AbiEii AbiEi_4 Neighborhood of RT #3 [987141, 996439] N6_Mtase COG4646 RVT-GII Intron_maturas2 HNHc SF2_C_SNF TnpV Feature: gene Location: 773762-776101 bp Feature: domain Description: VirB4 Location: 773810-774206 bp Feature: domain Description: VirB4 Location: 77381 0-774206 bp Feature: domain Description: TraC-F-type Location: 774686-775949 bp Feature: domain Description: TraC-F-type Location: 774686-775949 bp Feature: gene Location: 776113-778821 bp Feature: domain Description: Phage_lysozyme2 Location: 777937-778456 bp Feature: domain Description: Phage_lysozyme2 Location: 777937-778456 bp Feature: domain Description: PRK08581 Location: 778561-778804 bp Feature: domain Description: PRK08581 Location: 778561 -778804 bp Feature: gene Location: 779530-781443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 779857-780592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 779857-780592 bp Feature: domain Description: cas_Csn1 Location: 781000-781282 bp Feature: domain Description: cas_Csn1 Location: 781 000-781 282 bp Feature: gene Location: 781725-782342 bp Feature: gene Location: 782345-782620 bp Feature: gene Location: 972358-974709 bp Feature: domain Description: TraC-F-type Location: 972757-974536 bp Feature: domain Description: TraC-F-type Location: 972757-974536 bp Feature: gene Location: 974711-977404 bp Feature: domain Description: Peptidase_M23 Location: 976154-976367 bp Feature: domain Description: Peptidase_M23 Location: 9761 54-976367 bp Feature: domain Description: Phage_lysozyme2 Location: 976508-977021 bp Feature: domain Description: Phage_lysozyme2 Location: 976508-977021 bp Feature: domain Description: PRK08581 Location: 977138-977387 bp Feature: domain Description: PRK08581 Location: 9771 38-977387 bp Feature: gene Location: 978113-980026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 978440-979175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 978440-9791 75 bp Feature: domain Description: cas_Csn1 Location: 979583-979865 bp Feature: domain Description: cas_Csn1 Location: 979583-979865 bp Feature: gene Location: 980357-981202 bp Feature: domain Description: AbiEii Location: 980456-981131 bp Feature: domain Description: AbiEii Location: 980456-981 1 31 bp Feature: gene Location: 981199-981789 bp Feature: domain Description: AbiEi_4 Location: 981217-981349 bp Feature: domain Description: AbiEi_4 Location: 981 21 7-981 349 bp Feature: gene Location: 987141-987692 bp Feature: gene Location: 987729-993203 bp Feature: domain Description: N6_Mtase Location: 989754-990342 bp Feature: domain Description: N6_Mtase Location: 989754-990342 bp Feature: domain Description: COG4646 Location: 990936-993060 bp Feature: domain Description: COG4646 Location: 990936-993060 bp Feature: gene Location: 993701-995479 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 993962-994754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 993962-994754 bp Feature: domain Description: Intron_maturas2 Location: 994859-995090 bp Feature: domain Description: Intron_maturas2 Location: 994859-995090 bp Feature: domain Description: HNHc Note: nucleases Location: 995255-995441 bp Feature: domain Description: HNHc Note: nucleases Location: 995255-995441 bp Feature: gene Location: 995617-996084 bp Feature: domain Description: SF2_C_SNF Location: 995863-996007 bp Feature: domain Description: SF2_C_SNF Location: 995863-996007 bp Feature: gene Location: 996065-996439 bp Feature: domain Description: TnpV Location: 996101-996431 bp Feature: domain Description: TnpV Location: 9961 01 -996431 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirB4 (COG3451), TraC-F-type (TIGR02746), Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein), RVT-GII, cas_Csn1 (TIGR01865), Peptidase_M23 (pfam01551), AbiEii (pfam08843), AbiEi_4 (pfam13338), N6_Mtase (pfam02384)
COG4646 (Adenine-specific DNA methylase, N12 class ), Intron_maturas2 (pfam01348), HNHc (smart00507), SF2_C_SNF (cd18793), TnpV (pfam14198)