myRT

myRT report for GCA_902703415.1_Combinated_assembly_ONT_-_Illumina

Download annotations/find similar RTs

Seq: LR740758.1 Escherichia coli strain BEN5202 genome assembly, chromosome: APEC5202 (5116815 bp)
Overview 1 RT 1: 3466075-3473555 bp Neighborhood of RT #1 [3466075, 3473557] RMtype1_S_EcoEI-TRD1-CR1_like RMtype1_S_EcoEI-TRD1-CR1_like HsdM RVT-GII GIIM PHA02517 InsE Feature: gene Location: 3466075-3467400 bp Ori: VZZ89700.1 Feature: domain Description: RMtype1_S_EcoEI-TRD1-CR1_like Location: 3466420-3466687 bp Feature: domain Description: RMtype1 _S_EcoEI-TRD1 -CR1 _like Location: 3466420-3466687 bp Feature: domain Description: RMtype1_S_EcoEI-TRD1-CR1_like Location: 3466858-3467344 bp Feature: domain Description: RMtype1 _S_EcoEI-TRD1 -CR1 _like Location: 3466858-3467344 bp Feature: gene Location: 3467407-3469830 bp Ori: VZZ89701.1 Feature: domain Description: HsdM Location: 3467428-3469372 bp Feature: domain Description: HsdM Location: 3467428-3469372 bp Feature: gene Location: 3470637-3472160 bp Ori: VZZ89702.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3470910-3471642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347091 0-3471 642 bp Feature: domain Description: GIIM Note: maturase Location: 3471717-3471915 bp Feature: domain Description: GIIM Note: maturase Location: 3471 71 7-3471 91 5 bp Feature: gene Location: 3472752-3473231 bp Ori: VZZ89703.1 Feature: domain Description: PHA02517 Location: 3472812-3473166 bp Feature: domain Description: PHA0251 7 Location: 347281 2-34731 66 bp Feature: gene Location: 3473231-3473557 bp Ori: VZZ89704.1 Feature: domain Description: InsE Location: 3473234-3473555 bp Feature: domain Description: InsE Location: 3473234-3473555 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RMtype1_S_EcoEI-TRD1-CR1_like (cd17260), HsdM (COG0286), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)