myRT

myRT report for GCA_902810345.1_SC455

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Seq: LR778146.1 Escherichia coli isolate SC455 genome assembly, chromosome: omosome1 (4655420 bp)
Overview 1 RT 1: 247833-256053 bp 2 RT 2: 1698702-1704298 bp Neighborhood of RT #1 [247833, 256124] COG4643 COG5519 Ogr_Delta RVT-Retrons PRK09692 FocA Neighborhood of RT #2 [1698702, 1704315] Q RVT-AbiP2 Phage_GPA DUF5405 Feature: gene Location: 247833-250520 bp Feature: domain Description: COG4643 Location: 247851-248781 bp Feature: domain Description: COG4643 Location: 247851 -248781 bp Feature: domain Description: COG5519 Location: 248847-250500 bp Feature: domain Description: COG551 9 Location: 248847-250500 bp Feature: gene Location: 250803-251075 bp Feature: domain Description: Ogr_Delta Location: 250827-250962 bp Feature: domain Description: Ogr_Delta Location: 250827-250962 bp Feature: gene Location: 251837-253024 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 251984-252557 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 251 984-252557 bp Feature: gene Location: 253715-254917 bp Feature: domain Description: PRK09692 Location: 253760-254909 bp Feature: domain Description: PRK09692 Location: 253760-254909 bp Feature: gene Location: 255192-256124 bp Feature: domain Description: FocA Location: 255276-256053 bp Feature: domain Description: FocA Location: 255276-256053 bp Feature: gene Location: 1698702-1699736 bp Feature: domain Description: Q Location: 1698705-1699728 bp Feature: domain Description: Q Location: 1 698705-1 699728 bp Feature: gene Location: 1699775-1699936 bp Feature: gene Location: 1699949-1701661 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1700531-1700984 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 700531 -1 700984 bp Feature: gene Location: 1701765-1703912 bp Feature: domain Description: Phage_GPA Location: 1702026-1703013 bp Feature: domain Description: Phage_GPA Location: 1 702026-1 70301 3 bp Feature: gene Location: 1704040-1704315 bp Feature: domain Description: DUF5405 Location: 1704058-1704298 bp Feature: domain Description: DUF5405 Location: 1 704058-1 704298 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4643 (Uncharacterized domain associated with phage/plasmid primase ), COG5519 (Uncharcterized protein, DUF927 family ), Ogr_Delta (pfam04606), RVT-Retrons, PRK09692 (Integrase; provisional), FocA (COG2116), Q (PHA02536), RVT-AbiP2, Phage_GPA (pfam05840), DUF5405 (pfam17399)