myRT

myRT report for GCA_902810395.1_SC477

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Seq: LR778152.1 Escherichia coli isolate SC477 genome assembly, chromosome: omosome1 (4658510 bp)
Overview 1 RT 1: 248010-256230 bp 2 RT 2: 1701999-1707595 bp Neighborhood of RT #1 [248010, 256301] COG4643 COG5519 Ogr_Delta RVT-Retrons PRK09692 FocA Neighborhood of RT #2 [1701999, 1707612] Q RVT-AbiP2 Phage_GPA DUF5405 Feature: gene Location: 248010-250697 bp Feature: domain Description: COG4643 Location: 248028-248958 bp Feature: domain Description: COG4643 Location: 248028-248958 bp Feature: domain Description: COG5519 Location: 249024-250677 bp Feature: domain Description: COG551 9 Location: 249024-250677 bp Feature: gene Location: 250980-251252 bp Feature: domain Description: Ogr_Delta Location: 251004-251139 bp Feature: domain Description: Ogr_Delta Location: 251 004-251 1 39 bp Feature: gene Location: 252014-253201 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 252161-252734 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2521 61 -252734 bp Feature: gene Location: 253892-255094 bp Feature: domain Description: PRK09692 Location: 253937-255086 bp Feature: domain Description: PRK09692 Location: 253937-255086 bp Feature: gene Location: 255369-256301 bp Feature: domain Description: FocA Location: 255453-256230 bp Feature: domain Description: FocA Location: 255453-256230 bp Feature: gene Location: 1701999-1703033 bp Feature: domain Description: Q Location: 1702002-1703025 bp Feature: domain Description: Q Location: 1 702002-1 703025 bp Feature: gene Location: 1703072-1703233 bp Feature: gene Location: 1703246-1704958 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1703828-1704281 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 703828-1 704281 bp Feature: gene Location: 1705062-1707209 bp Feature: domain Description: Phage_GPA Location: 1705323-1706310 bp Feature: domain Description: Phage_GPA Location: 1 705323-1 70631 0 bp Feature: gene Location: 1707337-1707612 bp Feature: domain Description: DUF5405 Location: 1707355-1707595 bp Feature: domain Description: DUF5405 Location: 1 707355-1 707595 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4643 (Uncharacterized domain associated with phage/plasmid primase ), COG5519 (Uncharcterized protein, DUF927 family ), Ogr_Delta (pfam04606), RVT-Retrons, PRK09692 (Integrase; provisional), FocA (COG2116), Q (PHA02536), RVT-AbiP2, Phage_GPA (pfam05840), DUF5405 (pfam17399)