myRT

myRT report for GCA_902855135.1_NGKP54_Chromosome

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Seq: LR793264.1 Klebsiella pneumoniae isolate NGKP54 genome assembly, chromosome: 1 (5143036 bp)
Overview 1 RT 1: 1213957-1221186 bp 2 RT 2: 4018464-4023440 bp Neighborhood of RT #1 [1213957, 1221188] PinE RVT-GII PRK10276 umuC Neighborhood of RT #2 [4018464, 4023445] PRK09692 PRK09692 SLATT_5 RVT-UG17 Psu PRK00872 Feature: gene Location: 1213957-1215903 bp Feature: gene Location: 1215994-1216572 bp Ori: CAB3556971.1 Gene: hin Feature: domain Description: PinE Location: 1216003-1216543 bp Feature: domain Description: PinE Location: 1 21 6003-1 21 6543 bp Feature: gene Location: 1218015-1218818 bp Ori: CAB3556972.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1218342-1218780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 21 8342-1 21 8780 bp Feature: gene Location: 1219298-1219921 bp Ori: CAB3556973.1 Gene: lexA_2 Feature: domain Description: PRK10276 Location: 1219505-1219916 bp Feature: domain Description: PRK1 0276 Location: 1 21 9505-1 21 991 6 bp Feature: gene Location: 1219878-1221188 bp Ori: CAB3556974.1 Gene: dinB_3 Feature: domain Description: umuC Location: 1219926-1221186 bp Feature: domain Description: umuC Location: 1 21 9926-1 221 1 86 bp Feature: gene Location: 4018464-4019258 bp Ori: CAB3559626.1 Gene: intS_3 Feature: domain Description: PRK09692 Location: 4018473-4018836 bp Feature: domain Description: PRK09692 Location: 401 8473-401 8836 bp Feature: domain Description: PRK09692 Location: 4018854-4019229 bp Feature: domain Description: PRK09692 Location: 401 8854-401 9229 bp Feature: gene Location: 4019490-4020131 bp Ori: CAB3559627.1 Feature: domain Description: SLATT_5 Location: 4019493-4020096 bp Feature: domain Description: SLATT_5 Location: 401 9493-4020096 bp Feature: gene Location: 4020326-4021735 bp Ori: CAB3559628.1 Gene: ltrA_2 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 4020563-4021175 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 4020563-4021 1 75 bp Feature: gene Location: 4022432-4022611 bp Ori: CAB3559629.1 Feature: domain Description: Psu Location: 4022450-4022609 bp Feature: domain Description: Psu Location: 4022450-4022609 bp Feature: gene Location: 4022978-4023445 bp Ori: CAB3559630.1 Feature: domain Description: PRK00872 Location: 4022987-4023440 bp Feature: domain Description: PRK00872 Location: 4022987-4023440 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), PRK09692 (Integrase; provisional), SLATT_5 (pfam18160), RVT-UG17, Psu (pfam07455), PRK00872 (hypothetical protein; Provisional)