myRT report for GCA_000021705.1_ASM2170v1
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Seq: CP001277.1 Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) genome (2110331 bp)
Associated domains:myRT
| PRK13878 (conjugal transfer relaxase TraI; Provisional) | , Bac_DNA_binding (pfam00216) | , RVT-GII | , GIIM (pfam08388) | , HNH (pfam01844) | , PRK09857 (recombination-promoting nuclease RpnA) | , RVT_N (pfam13655) | , gpmA (PRK14120) | , PRK06019 (phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed) | , coaE (PRK14734) |
HNHc (smart00507), T3SC_I_like | , typeII_sec_gspG (TIGR01710) | , GspF (TIGR02120) | , rne (PRK10811) | , PRK05451 (dihydroorotase; Provisional) | , Peptidase_C80 (pfam11713) | , COG2931 (Ca2+-binding protein, RTX toxin-related ) | , PRK11025 (23S rRNA pseudouridine(955/2504/2580) synthase RluC) | , PRK11193 (23S rRNA accumulation protein YceD) |
PRK15057 (UDP-glucose 6-dehydrogenase; Provisional), PRK10535 (macrolide ABC transporter ATP-binding protein/permease MacB) | , PRK11578 (macrolide transporter subunit MacA; Provisional) | , PRK14012 (IscS subfamily cysteine desulfurase) | , HTH_XRE (smart00530) | , PRK09956 (ISNCY family transposase) | , S18 (TIGR00165) | , PRK02801 (primosomal replication protein N; Provisional) | , HTH_Tnp_IS630 (pfam01710) | , PL1_Passenger_AT (cd01343) |
PRK15319 (fibronectin-binding autotransporter adhesin ShdA), Peptidase_C58 (pfam03543) | , rpsL (PRK05163) | , PRK05269 (transaldolase B; Provisional) | , PRK12346 (transaldolase A; Provisional) | , ZapD (pfam07072) | , PRK13754 (fertility inhibition protein FinO) | , Transposase_31 (pfam04754) | , Mrr_cat (pfam04471) | , group_II_RT_mat (TIGR04416) |
ndk (PRK00668), PRK11194 (ribosomal RNA large subunit methyltransferase N; Provisional) | , PRK11316 (bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE) | , L9 (TIGR00158) | , lolA (TIGR00547) | , parE_Gneg (TIGR01055) | , DDE_3 (pfam13358) | , DDE_Tnp_Tn3 (pfam01526) | , TraG_VirD4 | , PRK08116 (hypothetical protein; Validated) |
Phage_rep_O (pfam04492), COG2932 (Phage repressor protein C, contains Cro/C1-type HTH and peptidase s24 domains ) | , COG4379 (Mu-like prophage tail protein gpP ) | , PRK15327 (PrgH/EprH family type III secretion inner membrane ring protein) | , retropepsin_like_bacteria (cd05483) | , HTH_Tnp_4 (pfam13613) | , HemolysinCabind (pfam00353) | , Peptidase_M15_4 (pfam13539) | , Pertactin (pfam03212) | , ACT_GcvR_1 (cd04893) |
gldA (PRK09423), Tra_M (pfam05261) | , plasmid_TraJ (TIGR02525) | , PRK10618 (phosphotransfer intermediate protein in two-component regulatory system with RcsBC; Provisional) | , PRK10840 (transcriptional regulator RcsB; Provisional) | , PRK10955 (envelope stress response regulator transcription factor CpxR) | , RuvB (COG2255) | , ruvA (TIGR00084) | , flhF (PRK14723) | , DUF4096 (pfam13340) |
Ank_4 (pfam13637), DUF1493 (pfam07377) | , Gly_transf_sug (pfam04488) | , rplS (PRK05338) |
