myRT

myRT report for GCA_000026305.1_ASM2630v1

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Seq: CU928162.2 Escherichia coli ED1a chromosome, complete genome (5209548 bp)
Overview 1 RT 1: 336447-340376 bp 2 RT 2: 3403075-3408412 bp 3 RT 3: 3504291-3507957 bp 4 RT 4: 4847548-4850412 bp 5 RT 5: 5080979-5084467 bp Neighborhood of RT #1 [336447, 340378] LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT-GII GIIM DDE_Tnp_IS66_C deoxyribose_mutarotase Neighborhood of RT #2 [3403075, 3408420] PFLE_PFLC RVT-GII RVT-GII GIIM YesM Neighborhood of RT #3 [3504291, 3507968] T_den_put_tspse PHA02517 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #4 [4847548, 4850432] DDE_Tnp_IS66 RVT-GII GIIM DDE_Tnp_IS66_C InsE Neighborhood of RT #5 [5080979, 5084487] InsE PHA02517 RVT-GII GIIM PHA02517 PHA02517 Feature: gene Location: 336447-337853 bp Ori: CAR06531.1 Feature: domain Description: LZ_Tnp_IS66 Location: 336564-336777 bp Feature: domain Description: LZ_Tnp_IS66 Location: 336564-336777 bp Feature: domain Description: zf-IS66 Location: 336804-336930 bp Feature: domain Description: zf-IS66 Location: 336804-336930 bp Feature: domain Description: DDE_Tnp_IS66 Location: 336975-337812 bp Feature: domain Description: DDE_Tnp_IS66 Location: 336975-33781 2 bp Feature: gene Location: 338061-338222 bp Feature: gene Location: 338315-339547 bp Ori: CAR06533.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 338516-339170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33851 6-3391 70 bp Feature: domain Description: GIIM Note: maturase Location: 339248-339470 bp Feature: domain Description: GIIM Note: maturase Location: 339248-339470 bp Feature: gene Location: 339663-339809 bp Ori: CAR06534.1 Feature: domain Description: DDE_Tnp_IS66_C Location: 339675-339786 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 339675-339786 bp Feature: gene Location: 339839-340378 bp Ori: CAR06535.1 Gene: deoM Feature: domain Description: deoxyribose_mutarotase Location: 339980-340376 bp Feature: domain Description: deoxyribose_mutarotase Location: 339980-340376 bp Feature: gene Location: 3403075-3403992 bp Ori: CAR09615.2 Feature: domain Description: PFLE_PFLC Location: 3403111-3403966 bp Feature: domain Description: PFLE_PFLC Location: 34031 1 1 -3403966 bp Feature: gene Location: 3404129-3405034 bp Feature: gene Location: 3405520-3406059 bp Ori: CAR09617.2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3405850-3405928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3405850-3405928 bp Feature: gene Location: 3406087-3406608 bp Ori: CAR09474.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3406093-3406375 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3406093-3406375 bp Feature: domain Description: GIIM Note: maturase Location: 3406423-3406603 bp Feature: domain Description: GIIM Note: maturase Location: 3406423-3406603 bp Feature: gene Location: 3406707-3406820 bp Feature: gene Location: 3407158-3408420 bp Ori: CAR09621.2 Feature: domain Description: YesM Location: 3407671-3408412 bp Feature: domain Description: YesM Location: 3407671 -340841 2 bp Feature: gene Location: 3504291-3504500 bp Ori: CAR09733.2 Feature: domain Description: T_den_put_tspse Location: 3504306-3504450 bp Feature: domain Description: T_den_put_tspse Location: 3504306-3504450 bp Feature: gene Location: 3504494-3504910 bp Feature: domain Description: PHA02517 Location: 3504497-3504899 bp Feature: domain Description: PHA0251 7 Location: 3504497-3504899 bp Feature: gene Location: 3505063-3506586 bp Ori: CAR09735.2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3505336-3506068 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3505336-3506068 bp Feature: domain Description: GIIM Note: maturase Location: 3506143-3506341 bp Feature: domain Description: GIIM Note: maturase Location: 35061 43-3506341 bp Feature: gene Location: 3507178-3507603 bp Gene: insO Feature: domain Description: PHA02517 Location: 3507202-3507538 bp Feature: domain Description: PHA0251 7 Location: 3507202-3507538 bp Feature: gene Location: 3507630-3507968 bp Feature: domain Description: InsE Location: 3507666-3507957 bp Feature: domain Description: InsE Location: 3507666-3507957 bp Feature: gene Location: 4847548-4847823 bp Ori: CAR10844.1 Feature: domain Description: DDE_Tnp_IS66 Location: 4847599-4847782 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4847599-4847782 bp Feature: gene Location: 4848031-4848192 bp Feature: gene Location: 4848285-4849517 bp Ori: CAR10992.2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4848486-4849140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4848486-48491 40 bp Feature: domain Description: GIIM Note: maturase Location: 4849218-4849440 bp Feature: domain Description: GIIM Note: maturase Location: 484921 8-4849440 bp Feature: gene Location: 4849630-4849779 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4849645-4849756 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4849645-4849756 bp Feature: gene Location: 4850007-4850432 bp Ori: CAR10848.1 Feature: domain Description: InsE Location: 4850022-4850412 bp Feature: domain Description: InsE Location: 4850022-485041 2 bp Feature: gene Location: 5080979-5081323 bp Ori: CAV18099.1 Feature: domain Description: InsE Location: 5081060-5081309 bp Feature: domain Description: InsE Location: 5081 060-5081 309 bp Feature: gene Location: 5081379-5081804 bp Gene: insO Feature: domain Description: PHA02517 Location: 5081403-5081739 bp Feature: domain Description: PHA0251 7 Location: 5081 403-5081 739 bp Feature: gene Location: 5082396-5083919 bp Ori: CAR11101.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5082669-5083401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5082669-5083401 bp Feature: domain Description: GIIM Note: maturase Location: 5083476-5083674 bp Feature: domain Description: GIIM Note: maturase Location: 5083476-5083674 bp Feature: gene Location: 5084072-5084248 bp Gene: insO Feature: domain Description: PHA02517 Location: 5084075-5084177 bp Feature: domain Description: PHA0251 7 Location: 5084075-50841 77 bp Feature: gene Location: 5084245-5084487 bp Feature: domain Description: PHA02517 Location: 5084248-5084467 bp Feature: domain Description: PHA0251 7 Location: 5084248-5084467 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), deoxyribose_mutarotase (cd09269), PFLE_PFLC (TIGR02494), YesM (COG2972), T_den_put_tspse (TIGR01784)
PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)