myRT

myRT report for GCA_000026325.2_ASM2632v2

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Seq: CU928148.1 Escherichia coli str. UMN026 plasmid p1ESCUM, complete genome (122301 bp)
Overview 1 RT 1: 13000-16824 bp 2 RT 2: 27163-29838 bp Neighborhood of RT #1 [13000, 16826] InsE PHA02517 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #2 [27163, 29846] InsE PHA02517 RVT-GII PRK10173 PRK10173 Feature: gene Location: 13000-13404 bp Ori: CAQ87380.1 Feature: domain Description: InsE Location: 13030-13366 bp Feature: domain Description: InsE Location: 1 3030-1 3366 bp Feature: gene Location: 13433-13789 bp Feature: domain Description: PHA02517 Location: 13436-13745 bp Feature: domain Description: PHA0251 7 Location: 1 3436-1 3745 bp Feature: gene Location: 13906-15429 bp Ori: CAQ87382.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14179-14911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 41 79-1 491 1 bp Feature: domain Description: GIIM Note: maturase Location: 14986-15184 bp Feature: domain Description: GIIM Note: maturase Location: 1 4986-1 51 84 bp Feature: gene Location: 16021-16503 bp Feature: domain Description: PHA02517 Location: 16084-16438 bp Feature: domain Description: PHA0251 7 Location: 1 6084-1 6438 bp Feature: gene Location: 16500-16826 bp Feature: domain Description: InsE Location: 16503-16824 bp Feature: domain Description: InsE Location: 1 6503-1 6824 bp Feature: gene Location: 27163-27489 bp Ori: CAQ87398.1 Feature: domain Description: InsE Location: 27166-27487 bp Feature: domain Description: InsE Location: 271 66-27487 bp Feature: gene Location: 27486-27968 bp Feature: domain Description: PHA02517 Location: 27549-27903 bp Feature: domain Description: PHA0251 7 Location: 27549-27903 bp Feature: gene Location: 28560-29063 bp Ori: CAQ87400.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28833-28902 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28833-28902 bp Feature: gene Location: 29102-29701 bp Ori: CAQ87401.1 Feature: domain Description: PRK10173 Location: 29375-29609 bp Feature: domain Description: PRK1 01 73 Location: 29375-29609 bp Feature: gene Location: 29397-29846 bp Ori: CAQ87402.1 Feature: domain Description: PRK10173 Location: 29400-29838 bp Feature: domain Description: PRK1 01 73 Location: 29400-29838 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)

Seq: CU928163.2 Escherichia coli UMN026 chromosome, complete genome (5202090 bp)
Overview 1 RT 1: 268336-273283 bp 2 RT 2: 2335692-2342320 bp Neighborhood of RT #1 [268336, 273283] YhhI YhhI YhhI RVT-GII GIIM YhhI YhhI YhhI Neighborhood of RT #2 [2335692, 2342320] AAA_15 RVT-Retrons Nuc_deoxyrib_tr Feature: gene Location: 268336-269295 bp Ori: CAR11449.1 Gene: yhhI Feature: domain Description: YhhI Location: 268342-268687 bp Feature: domain Description: YhhI Location: 2 68342 -2 68687 bp Feature: domain Description: YhhI Location: 268744-269098 bp Feature: domain Description: YhhI Location: 2 68744-2 69098 bp Feature: domain Description: YhhI Location: 269098-269278 bp Feature: domain Description: YhhI Location: 2 69098-2 692 78 bp Feature: gene Location: 269323-269463 bp Feature: gene Location: 269827-271077 bp Ori: CAR11451.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 270031-270688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 70031-2 70688 bp Feature: domain Description: GIIM Note: maturase Location: 270769-270991 bp Feature: domain Description: GIIM Note: maturase Location: 2 70769-2 70991 bp Feature: gene Location: 271524-272660 bp Ori: CAR11452.1 Gene: yhhI Feature: domain Description: YhhI Location: 271527-271890 bp Feature: domain Description: YhhI Location: 2 7152 7-2 71890 bp Feature: domain Description: YhhI Location: 271947-272301 bp Feature: domain Description: YhhI Location: 2 71947-2 72 301 bp Feature: domain Description: YhhI Location: 272319-272562 bp Feature: domain Description: YhhI Location: 2 72 319-2 72 562 bp Feature: gene Location: 272780-273283 bp Feature: gene Location: 2335692-2335829 bp Feature: gene Location: 2337029-2339305 bp Ori: CAR13499.1 Feature: domain Description: AAA_15 Location: 2337062-2338070 bp Feature: domain Description: AAA_15 Location: 2 337062 -2 338070 bp Feature: gene Location: 2339420-2340520 bp Ori: CAR13500.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2339600-2340134 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 339600-2 340134 bp Feature: gene Location: 2341176-2341670 bp Ori: CAR13501.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 2341320-2341494 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 2 34132 0-2 341494 bp Feature: gene Location: 2342042-2342320 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhI (COG5433), RVT-GII, GIIM (pfam08388), AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014)