myRT

myRT report for GCA_000143785.1_ASM14378v1

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Seq: GL379781.1 Chryseobacterium gleum ATCC 35910 genomic scaffold SCAFFOLD1, whole genome shotgun sequence (3972748 bp)
Overview 1 RT 1: 1538263-1544890 bp 2 RT 2: 2348478-2355100 bp 3 RT 3: 2365880-2370035 bp Neighborhood of RT #1 [1538263, 1544913] Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc DUF4141 Bac_Flav_CT_J Neighborhood of RT #2 [2348478, 2355123] Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc DUF4141 Bac_Flav_CT_J Neighborhood of RT #3 [2365880, 2370058] RVT-GII Intron_maturas2 HNHc DUF932 Feature: gene Location: 1538263-1540656 bp Feature: domain Description: Bac_Flav_CT_G Location: 1538266-1540648 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 538266-1 540648 bp Feature: gene Location: 1540625-1541167 bp Feature: gene Location: 1541147-1543021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1541471-1542293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 541 471 -1 542293 bp Feature: domain Description: Intron_maturas2 Location: 1542422-1542644 bp Feature: domain Description: Intron_maturas2 Location: 1 542422-1 542644 bp Feature: domain Description: HNHc Note: nucleases Location: 1542824-1542992 bp Feature: domain Description: HNHc Note: nucleases Location: 1 542824-1 542992 bp Feature: gene Location: 1543283-1543915 bp Feature: domain Description: DUF4141 Location: 1543301-1543454 bp Feature: domain Description: DUF41 41 Location: 1 543301 -1 543454 bp Feature: gene Location: 1543918-1544913 bp Feature: domain Description: Bac_Flav_CT_J Location: 1543924-1544890 bp Feature: domain Description: Bac_Flav_CT_J Location: 1 543924-1 544890 bp Feature: gene Location: 2348478-2350868 bp Feature: domain Description: Bac_Flav_CT_G Location: 2348481-2350860 bp Feature: domain Description: Bac_Flav_CT_G Location: 2348481 -2350860 bp Feature: gene Location: 2350750-2351379 bp Feature: gene Location: 2351359-2353233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2351683-2352505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2351 683-2352505 bp Feature: domain Description: Intron_maturas2 Location: 2352634-2352856 bp Feature: domain Description: Intron_maturas2 Location: 2352634-2352856 bp Feature: domain Description: HNHc Note: nucleases Location: 2353036-2353204 bp Feature: domain Description: HNHc Note: nucleases Location: 2353036-2353204 bp Feature: gene Location: 2353493-2354125 bp Feature: domain Description: DUF4141 Location: 2353511-2353664 bp Feature: domain Description: DUF41 41 Location: 235351 1 -2353664 bp Feature: gene Location: 2354128-2355123 bp Feature: domain Description: Bac_Flav_CT_J Location: 2354134-2355100 bp Feature: domain Description: Bac_Flav_CT_J Location: 23541 34-23551 00 bp Feature: gene Location: 2365880-2366218 bp Feature: gene Location: 2366245-2366439 bp Feature: gene Location: 2366760-2368568 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2367024-2367846 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2367024-2367846 bp Feature: domain Description: Intron_maturas2 Location: 2367924-2368257 bp Feature: domain Description: Intron_maturas2 Location: 2367924-2368257 bp Feature: domain Description: HNHc Note: nucleases Location: 2368401-2368548 bp Feature: domain Description: HNHc Note: nucleases Location: 2368401 -2368548 bp Feature: gene Location: 2368925-2369083 bp Feature: gene Location: 2369111-2370058 bp Feature: domain Description: DUF932 Location: 2369390-2370035 bp Feature: domain Description: DUF932 Location: 2369390-2370035 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_G (TIGR03783), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF4141 (pfam13605), Bac_Flav_CT_J (TIGR03782), DUF932 (pfam06067)