myRT

myRT report for GCA_000145685.1_ASM14568v1

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Seq: GL384649.1 Pseudomonas amygdali pv. aesculi str. 0893_23 genomic scaffold Scaffold_30, whole genome shotgun sequence (62608 bp)
Overview 1 RT 1: 10944-16540 bp 2 RT 2: 28246-37162 bp Neighborhood of RT #1 [10944, 16608] GST_N_GTT2_like GST_C_GTT2_like AcrR RVT-UG9 PRK14975 PRK14975 Neighborhood of RT #2 [28246, 37182] SIR2-like RVT-Retrons PRK09692 Feature: gene Location: 10944-11654 bp Ori: EGH03578.1 Feature: domain Description: GST_N_GTT2_like Location: 10992-11217 bp Feature: domain Description: GST_N_GTT2_like Location: 1 0992-1 1 21 7 bp Feature: domain Description: GST_C_GTT2_like Location: 11253-11601 bp Feature: domain Description: GST_C_GTT2_like Location: 1 1 253-1 1 601 bp Feature: gene Location: 11791-12369 bp Ori: EGH03579.1 Feature: domain Description: AcrR Location: 11806-12280 bp Feature: domain Description: AcrR Location: 1 1 806-1 2280 bp Feature: gene Location: 13145-14962 bp Ori: EGH03580.1 Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 13532-14168 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 1 3532-1 41 68 bp Feature: gene Location: 14955-15909 bp Ori: EGH03581.1 Feature: domain Description: PRK14975 Location: 15687-15903 bp Feature: domain Description: PRK1 4975 Location: 1 5687-1 5903 bp Feature: gene Location: 16012-16608 bp Ori: EGH03582.1 Feature: domain Description: PRK14975 Location: 16015-16540 bp Feature: domain Description: PRK1 4975 Location: 1 601 5-1 6540 bp Feature: gene Location: 28246-28419 bp Feature: gene Location: 28910-32506 bp Ori: EGH03595.1 Feature: domain Description: SIR2-like Location: 29012-29669 bp Feature: domain Description: SIR2-like Location: 2901 2-29669 bp Feature: gene Location: 32726-34165 bp Ori: EGH03596.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32729-33173 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32729-331 73 bp Feature: gene Location: 35174-36016 bp Feature: gene Location: 36013-37182 bp Ori: EGH03598.1 Feature: domain Description: PRK09692 Location: 36019-37162 bp Feature: domain Description: PRK09692 Location: 3601 9-371 62 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GST_N_GTT2_like (cd03051), GST_C_GTT2_like (cd03182), AcrR (COG1309), RVT-UG9, PRK14975 (bifunctional 3'-5' exonuclease/DNA polymerase; Provisional), SIR2-like (cd01406), RVT-Retrons, PRK09692 (Integrase; provisional)