myRT

myRT report for GCA_000146345.1_ASM14634v1

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Seq: GL397071.1 Peptoniphilus duerdenii ATCC BAA-1640 genomic scaffold SCAFFOLD1, whole genome shotgun sequence (2106333 bp)
Overview 1 RT 1: 220770-230000 bp Neighborhood of RT #1 [220770, 230029] RlmL PAS_8 RsbU RVT-AbiA HEPN_AbiA_CTD PRK15483 Mod PRK11524 T3RM_EcoP15I_C Feature: gene Location: 220770-221906 bp Ori: EFM26189.1 Feature: domain Description: RlmL Location: 220794-221889 bp Feature: domain Description: RlmL Location: 220794-221 889 bp Feature: gene Location: 221909-222988 bp Ori: EFM26190.1 Feature: domain Description: PAS_8 Location: 221945-222080 bp Feature: domain Description: PAS_8 Location: 221 945-222080 bp Feature: domain Description: RsbU Location: 222194-222983 bp Feature: domain Description: RsbU Location: 2221 94-222983 bp Feature: gene Location: 223152-225044 bp Ori: EFM26191.1 Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 223527-224052 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 223527-224052 bp Feature: domain Description: HEPN_AbiA_CTD Location: 224649-225042 bp Feature: domain Description: HEPN_AbiA_CTD Location: 224649-225042 bp Feature: gene Location: 225034-228045 bp Ori: EFM26192.1 Feature: domain Description: PRK15483 Location: 225100-228040 bp Feature: domain Description: PRK1 5483 Location: 2251 00-228040 bp Feature: gene Location: 227999-230029 bp Ori: EFM26193.1 Gene: mod Feature: domain Description: Mod Location: 228134-228764 bp Feature: domain Description: Mod Location: 2281 34-228764 bp Feature: domain Description: PRK11524 Location: 229271-229406 bp Feature: domain Description: PRK1 1 524 Location: 229271 -229406 bp Feature: domain Description: T3RM_EcoP15I_C Location: 229715-230000 bp Feature: domain Description: T3RM_EcoP1 5I_C Location: 22971 5-230000 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RlmL (COG0116), PAS_8 (pfam13188), RsbU (COG2208), RVT-AbiA, HEPN_AbiA_CTD (pfam18732), PRK15483 (type III restriction-modification system endonuclease), Mod (COG2189), PRK11524 (adenine-specific DNA-methyltransferase), T3RM_EcoP15I_C (pfam18273)