myRT

myRT report for GCA_000148465.1_Scla_1.0

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Seq: CM001015.1 Streptomyces clavuligerus ATCC 27064 chromosome, whole genome shotgun sequence (6742175 bp)
Overview 1 RT 1: 563937-570871 bp 2 RT 2: 3226143-3233896 bp Neighborhood of RT #1 [563937, 570948] KOG4658 TPR_12 TPR_12 TPR RVT-GII GIIM HTH_23 HTH_33 Neighborhood of RT #2 [3226143, 3233896] CRISPR_Cse1 PRK09694 Cas3_C RVT-UNC AbiEii AbiEii Feature: gene Location: 563937-565451 bp Feature: domain Description: KOG4658 Location: 563949-564426 bp Feature: domain Description: KOG4658 Location: 563949-564426 bp Feature: domain Description: TPR_12 Location: 564810-564996 bp Feature: domain Description: TPR_1 2 Location: 56481 0-564996 bp Feature: domain Description: TPR_12 Location: 565050-565242 bp Feature: domain Description: TPR_1 2 Location: 565050-565242 bp Feature: domain Description: TPR Location: 565293-565368 bp Feature: domain Description: TPR Location: 565293-565368 bp Feature: gene Location: 567086-567802 bp Feature: gene Location: 568101-569531 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 568422-569106 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 568422-5691 06 bp Feature: domain Description: GIIM Note: maturase Location: 569175-569409 bp Feature: domain Description: GIIM Note: maturase Location: 5691 75-569409 bp Feature: gene Location: 570107-570355 bp Feature: gene Location: 570409-570948 bp Feature: domain Description: HTH_23 Location: 570478-570601 bp Feature: domain Description: HTH_23 Location: 570478-570601 bp Feature: domain Description: HTH_33 Location: 570700-570871 bp Feature: domain Description: HTH_33 Location: 570700-570871 bp Feature: gene Location: 3226143-3227927 bp Feature: domain Description: CRISPR_Cse1 Location: 3226146-3227535 bp Feature: domain Description: CRISPR_Cse1 Location: 32261 46-3227535 bp Feature: gene Location: 3228068-3231118 bp Feature: domain Description: PRK09694 Location: 3228119-3230207 bp Feature: domain Description: PRK09694 Location: 32281 1 9-3230207 bp Feature: domain Description: Cas3_C Location: 3230600-3230906 bp Feature: domain Description: Cas3_C Location: 3230600-3230906 bp Feature: gene Location: 3231093-3232463 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3231495-3231912 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3231 495-3231 91 2 bp Feature: gene Location: 3232492-3233505 bp Feature: domain Description: AbiEii Location: 3232582-3232684 bp Feature: domain Description: AbiEii Location: 3232582-3232684 bp Feature: domain Description: AbiEii Location: 3233011-3233245 bp Feature: domain Description: AbiEii Location: 323301 1 -3233245 bp Feature: gene Location: 3233192-3233896 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG4658 (KOG4658, Apoptotic ATPase ), TPR_12 (pfam13424), TPR (smart00028), RVT-GII, GIIM (pfam08388), HTH_23 (pfam13384), HTH_33 (pfam13592), CRISPR_Cse1 (pfam09481), PRK09694 (CRISPR-associated helicase/endonuclease Cas3), Cas3_C (pfam18395)
RVT-UG23/RVT-GII/RVT-CRISPR/RVT-UG13(RVT-UNC), AbiEii (pfam08843)