myRT

myRT report for GCA_000152485.1_ASM15248v1

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Seq: DS267816.1 Vibrio sp. Ex25 scf_1101759099879 genomic scaffold, whole genome shotgun sequence (158105 bp)
Overview 1 RT 1: 49403-56129 bp Neighborhood of RT #1 [49403, 56245] SmpB PRK09692 RVT-Retrons RbsK RCL Feature: gene Location: 49403-50395 bp Ori: EDN57641.1 Feature: domain Description: SmpB Location: 49940-50387 bp Feature: domain Description: SmpB Location: 49940-50387 bp Feature: gene Location: 50995-52242 bp Ori: EDN57642.1 Feature: domain Description: PRK09692 Location: 50998-52231 bp Feature: domain Description: PRK09692 Location: 50998-52231 bp Feature: gene Location: 52299-53264 bp Ori: EDN57643.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 52404-52980 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 52404-52980 bp Feature: gene Location: 53266-54267 bp Feature: gene Location: 55004-56245 bp Ori: EDN57645.1 Feature: domain Description: RbsK Location: 55451-55784 bp Feature: domain Description: RbsK Location: 55451 -55784 bp Feature: domain Description: RCL Location: 55856-56129 bp Feature: domain Description: RCL Location: 55856-561 29 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SmpB (pfam01668), PRK09692 (Integrase; provisional), RVT-Retrons, RbsK (COG0524), RCL (COG3613)