myRT

myRT report for GCA_000152565.1_ASM15256v1

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Seq: CH482377.1 Burkholderia cenocepacia PC184 supercont1.1 genomic scaffold, whole genome shotgun sequence (3492087 bp)
Overview 1 RT 1: 1116935-1124165 bp 2 RT 2: 1872221-1877335 bp Neighborhood of RT #1 [1116935, 1124170] MFS_YcaD_like IS285 RVT-GII GIIM fum_ac_acetase PRK05341 Neighborhood of RT #2 [1872221, 1877349] YcbL-like_MBL-fold RlpA RVT-GII GIIM RsmI PRK14673 PRK14682 Feature: gene Location: 1116935-1118095 bp Feature: domain Description: MFS_YcaD_like Location: 1116971-1118054 bp Feature: domain Description: MFS_YcaD_like Location: 1 1 1 6971 -1 1 1 8054 bp Feature: gene Location: 1118212-1119492 bp Feature: domain Description: IS285 Location: 1118296-1119478 bp Feature: domain Description: IS285 Location: 1 1 1 8296-1 1 1 9478 bp Feature: gene Location: 1119694-1121073 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1120039-1120654 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 20039-1 1 20654 bp Feature: domain Description: GIIM Note: maturase Location: 1120714-1120915 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 2071 4-1 1 2091 5 bp Feature: gene Location: 1121535-1122881 bp Feature: domain Description: fum_ac_acetase Location: 1121628-1122870 bp Feature: domain Description: fum_ac_acetase Location: 1 1 21 628-1 1 22870 bp Feature: gene Location: 1122836-1124170 bp Feature: domain Description: PRK05341 Location: 1122854-1124165 bp Feature: domain Description: PRK05341 Location: 1 1 22854-1 1 241 65 bp Feature: gene Location: 1872221-1873057 bp Feature: domain Description: YcbL-like_MBL-fold Location: 1872425-1872989 bp Feature: domain Description: YcbL-like_MBL-fold Location: 1 872425-1 872989 bp Feature: gene Location: 1873491-1874132 bp Feature: domain Description: RlpA Location: 1873590-1874097 bp Feature: domain Description: RlpA Location: 1 873590-1 874097 bp Feature: gene Location: 1874590-1875957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1874923-1875538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 874923-1 875538 bp Feature: domain Description: GIIM Note: maturase Location: 1875598-1875799 bp Feature: domain Description: GIIM Note: maturase Location: 1 875598-1 875799 bp Feature: gene Location: 1876065-1876979 bp Feature: domain Description: RsmI Location: 1876140-1876953 bp Feature: domain Description: RsmI Location: 1 8761 40-1 876953 bp Feature: gene Location: 1876951-1877349 bp Feature: domain Description: PRK14673 Location: 1877002-1877272 bp Feature: domain Description: PRK1 4673 Location: 1 877002-1 877272 bp Feature: domain Description: PRK14682 Location: 1877272-1877335 bp Feature: domain Description: PRK1 4682 Location: 1 877272-1 877335 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_YcaD_like (cd17477), IS285 (COG3328), RVT-GII, GIIM (pfam08388), fum_ac_acetase (TIGR01266), PRK05341 (homogentisate 1,2-dioxygenase; Provisional), YcbL-like_MBL-fold (cd07737), RlpA (COG0797), RsmI (COG0313), PRK14673 (hypothetical protein; Provisional)
PRK14682 (hypothetical protein; Provisional)

Seq: CH482379.1 Burkholderia cenocepacia PC184 supercont1.3 genomic scaffold, whole genome shotgun sequence (698631 bp)
Overview 1 RT 1: 123018-129154 bp Neighborhood of RT #1 [123018, 129177] HutH his_ut_repres RVT-Retrons Histone_HNS MFS_MucK Feature: gene Location: 123018-124511 bp Feature: domain Description: HutH Location: 123027-124485 bp Feature: domain Description: HutH Location: 12 302 7-12 4485 bp Feature: gene Location: 124562-125317 bp Feature: domain Description: his_ut_repres Location: 124640-125312 bp Feature: domain Description: his_ut_repres Location: 12 4640-12 5312 bp Feature: gene Location: 125535-126995 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 126111-126747 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 6111-12 6747 bp Feature: gene Location: 127258-127644 bp Feature: domain Description: Histone_HNS Location: 127336-127573 bp Feature: domain Description: Histone_HNS Location: 12 7336-12 7573 bp Feature: gene Location: 127930-129177 bp Feature: domain Description: MFS_MucK Location: 128020-129154 bp Feature: domain Description: MFS_MucK Location: 12 802 0-12 9154 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HutH (COG2986), his_ut_repres (TIGR02018), RVT-Retrons, Histone_HNS (pfam00816), MFS_MucK (cd17371)