myRT

myRT report for GCA_000153265.1_ASM15326v1

Download annotations/find similar RTs

Seq: CH902601.1 Vibrio angustum S14 1099604003229 genomic scaffold, whole genome shotgun sequence (492617 bp)
Overview 1 RT 1: 228859-235134 bp Neighborhood of RT #1 [228859, 235134] Cas6_I-F RVT-UG1 Feature: gene Location: 228859-229470 bp Ori: EAS64066.1 Feature: domain Description: Cas6_I-F Location: 228871-229453 bp Feature: domain Description: Cas6_I-F Location: 228871 -229453 bp Feature: gene Location: 229835-230248 bp Feature: gene Location: 230532-234236 bp Ori: EAS64068.1 Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 231144-231669 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 231 1 44-231 669 bp Feature: gene Location: 234257-234379 bp Feature: gene Location: 234655-235134 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas6_I-F (cl09835), RVT-UG1

Seq: CH902599.1 Vibrio angustum S14 1099604003227 genomic scaffold, whole genome shotgun sequence (1768487 bp)
Overview 1 RT 1: 1651151-1655985 bp 2 RT 2: 1691588-1699470 bp Neighborhood of RT #1 [1651151, 1655985] RVT_N RVT-GII GIIM Neighborhood of RT #2 [1691588, 1699499] DUF823 BID_1 Big_1 DUF1566 RVT-DGRs Avd_like MFS_MdfA_MDR_like Feature: gene Location: 1651151-1651468 bp Feature: gene Location: 1651792-1651989 bp Feature: gene Location: 1651905-1653377 bp Ori: EAS63283.1 Feature: domain Description: RVT_N Location: 1651953-1652196 bp Feature: domain Description: RVT_N Location: 1651953-1652 196 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1652241-1652868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1652 2 41-1652 868 bp Feature: domain Description: GIIM Note: maturase Location: 1652928-1653153 bp Feature: domain Description: GIIM Note: maturase Location: 1652 92 8-1653153 bp Feature: gene Location: 1654605-1655246 bp Feature: gene Location: 1655704-1655985 bp Feature: gene Location: 1691588-1692616 bp Feature: gene Location: 1692699-1695197 bp Ori: EAS63309.1 Feature: domain Description: DUF823 Location: 1693743-1694088 bp Feature: domain Description: DUF82 3 Location: 1693743-1694088 bp Feature: domain Description: BID_1 Location: 1694106-1694331 bp Feature: domain Description: BID_1 Location: 1694106-1694331 bp Feature: domain Description: Big_1 Location: 1694442-1694640 bp Feature: domain Description: Big_1 Location: 1694442 -1694640 bp Feature: domain Description: DUF1566 Location: 1694922-1695189 bp Feature: domain Description: DUF1566 Location: 169492 2 -1695189 bp Feature: gene Location: 1696291-1697490 bp Ori: EAS63310.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1696426-1697140 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 169642 6-1697140 bp Feature: gene Location: 1697542-1697922 bp Ori: EAS63311.1 Feature: domain Description: Avd_like Location: 1697572-1697905 bp Feature: domain Description: Avd_like Location: 1697572 -1697905 bp Feature: gene Location: 1698351-1699499 bp Ori: EAS63312.1 Feature: domain Description: MFS_MdfA_MDR_like Location: 1698357-1699470 bp Feature: domain Description: MFS_MdfA_MDR_like Location: 1698357-1699470 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF823 (pfam05689), BID_1 (smart00634), Big_1 (pfam02369), DUF1566 (pfam07603), RVT-DGRs, Avd_like (cd16376), MFS_MdfA_MDR_like (cd17320)