myRT

myRT report for GCA_000153365.1_ASM15336v1

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Seq: AAOX01000010.1 Bacillus sp. NRRL B-14911 1099999053121, whole genome shotgun sequence (146055 bp)
Overview 1 RT 1: 21585-26755 bp Neighborhood of RT #1 [21585, 29772] NlpD RVT-GII Intron_maturas2 HNHc TrbL Feature: gene Location: 21585-22286 bp Ori: EAR66134.1 Feature: domain Description: NlpD Location: 21642-22281 bp Feature: domain Description: NlpD Location: 21 642-22281 bp Feature: gene Location: 22301-22483 bp Feature: gene Location: 22487-24310 bp Ori: EAR66136.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22751-23582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22751 -23582 bp Feature: domain Description: Intron_maturas2 Location: 23738-24071 bp Feature: domain Description: Intron_maturas2 Location: 23738-24071 bp Feature: domain Description: HNHc Note: nucleases Location: 24128-24281 bp Feature: domain Description: HNHc Note: nucleases Location: 241 28-24281 bp Feature: gene Location: 24897-26054 bp Feature: gene Location: 26047-29772 bp Ori: EAR66138.1 Feature: domain Description: TrbL Location: 26278-26755 bp Feature: domain Description: TrbL Location: 26278-26755 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NlpD (COG0739), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), TrbL (pfam04610)

Seq: CH672355.1 Bacillus sp. NRRL B-14911 scf_1099999053200 genomic scaffold, whole genome shotgun sequence (684932 bp)
Overview 1 RT 1: 512849-517534 bp Neighborhood of RT #1 [512849, 517548] YgcG LemA RVT-GII GIIM YdjM SRPBCC_CalC_Aha1-like Feature: gene Location: 512849-513589 bp Ori: EAR67411.1 Feature: domain Description: YgcG Location: 512882-513473 bp Feature: domain Description: YgcG Location: 512 882 -513473 bp Feature: gene Location: 513589-514179 bp Ori: EAR67412.1 Feature: domain Description: LemA Location: 513628-514159 bp Feature: domain Description: LemA Location: 51362 8-514159 bp Feature: gene Location: 514369-515625 bp Ori: EAR67413.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 514582-515197 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 514582 -515197 bp Feature: domain Description: GIIM Note: maturase Location: 515248-515479 bp Feature: domain Description: GIIM Note: maturase Location: 5152 48-515479 bp Feature: gene Location: 516182-516808 bp Ori: EAR67414.1 Feature: domain Description: YdjM Location: 516185-516800 bp Feature: domain Description: YdjM Location: 516185-516800 bp Feature: gene Location: 516970-517548 bp Ori: EAR67415.1 Feature: domain Description: SRPBCC_CalC_Aha1-like Location: 517072-517534 bp Feature: domain Description: SRPBCC_CalC_Aha1-like Location: 517072 -517534 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YgcG (COG1512), LemA (pfam04011), RVT-GII, GIIM (pfam08388), YdjM (pfam04307), SRPBCC_CalC_Aha1-like (cd07814)

Seq: AAOX01000012.1 Bacillus sp. NRRL B-14911 1099999053120, whole genome shotgun sequence (134330 bp)
Overview 1 RT 1: 9596-14904 bp Neighborhood of RT #1 [9596, 14978] DUF2621 RVT-UG12 MFS_MefA_like Feature: gene Location: 9596-10030 bp Ori: EAR65825.1 Feature: domain Description: DUF2621 Location: 9617-10028 bp Feature: domain Description: DUF2621 Location: 9617-10028 bp Feature: gene Location: 10191-10535 bp Feature: gene Location: 11035-12663 bp Ori: EAR65827.1 Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 11377-11827 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 113 77-11827 bp Feature: gene Location: 12928-13359 bp Feature: gene Location: 13728-14978 bp Ori: EAR65829.1 Feature: domain Description: MFS_MefA_like Location: 13785-14904 bp Feature: domain Description: MFS_MefA_like Location: 13 785-14904 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2621 (pfam11084), RVT-UG12, MFS_MefA_like (cd06173)