myRT

myRT report for GCA_000153585.1_ASM15358v1

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Seq: CH899780.1 Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24 scf_1101007000698 genomic scaffold, whole genome shotgun sequence (80677 bp)
Overview 1 RT 1: 75239-79968 bp Neighborhood of RT #1 [75239, 80165] ftsW T_den_put_tspse RVT-GII GIIM PDDEXK_2 Feature: gene Location: 75239-75841 bp Feature: domain Description: ftsW Location: 75242-75785 bp Feature: domain Description: ftsW Location: 75242-75785 bp Feature: gene Location: 76212-76952 bp Feature: domain Description: T_den_put_tspse Location: 76338-76944 bp Feature: domain Description: T_den_put_tspse Location: 76338-76944 bp Feature: gene Location: 76949-78397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77765-77840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77765-77840 bp Feature: domain Description: GIIM Note: maturase Location: 77891-78125 bp Feature: domain Description: GIIM Note: maturase Location: 77891 -781 25 bp Feature: gene Location: 78327-78785 bp Feature: gene Location: 79722-80165 bp Feature: domain Description: PDDEXK_2 Location: 79749-79968 bp Feature: domain Description: PDDEXK_2 Location: 79749-79968 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ftsW (TIGR02614), T_den_put_tspse (TIGR01784), RVT-GII, GIIM (pfam08388), PDDEXK_2 (pfam12784)

Seq: CH899778.1 Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24 scf_1101007000699 genomic scaffold, whole genome shotgun sequence (144336 bp)
Overview 1 RT 1: 115518-119715 bp Neighborhood of RT #1 [115518, 119715] RVT-GII UvrD Feature: gene Location: 115518-115646 bp Feature: gene Location: 115679-115900 bp Feature: gene Location: 116063-116206 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 116066-116201 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 116066-1162 01 bp Feature: gene Location: 116430-116882 bp Feature: domain Description: UvrD Location: 116448-116865 bp Feature: domain Description: UvrD Location: 116448-116865 bp Feature: gene Location: 118249-119715 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, UvrD (COG0210)

Seq: CH899777.1 Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24 scf_1101007000700 genomic scaffold, whole genome shotgun sequence (286871 bp)
Overview 1 RT 1: 203921-211005 bp Neighborhood of RT #1 [203921, 211028] gpV RVT-GII PRK07078 repA HepA Feature: gene Location: 203921-204286 bp Feature: domain Description: gpV Location: 203927-204281 bp Feature: domain Description: gpV Location: 203 927-204281 bp Feature: gene Location: 204372-204671 bp Feature: gene Location: 205499-206737 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 205679-206369 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 205679-2063 69 bp Feature: gene Location: 208076-210100 bp Feature: domain Description: PRK07078 Location: 208139-209057 bp Feature: domain Description: PRK07078 Location: 20813 9-209057 bp Feature: domain Description: repA Location: 209156-209915 bp Feature: domain Description: repA Location: 209156-209915 bp Feature: gene Location: 210807-211028 bp Feature: domain Description: HepA Location: 210810-211005 bp Feature: domain Description: HepA Location: 210810-211005 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT gpV (COG4540), RVT-GII, PRK07078 (hypothetical protein; Validated), repA, HepA (COG0553)

Seq: CH899776.1 Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24 scf_1101007000701 genomic scaffold, whole genome shotgun sequence (290008 bp)
Overview 1 RT 1: 105540-111240 bp Neighborhood of RT #1 [105540, 111242] apaG PDDEXK_2 RVT_N RVT-GII GIIM PRK14012 Feature: gene Location: 105540-105941 bp Feature: domain Description: apaG Location: 105558-105921 bp Feature: domain Description: apaG Location: 105558-105921 bp Feature: gene Location: 106242-106592 bp Feature: domain Description: PDDEXK_2 Location: 106248-106395 bp Feature: domain Description: PDDEXK_2 Location: 10624 8-106395 bp Feature: gene Location: 107014-108561 bp Feature: domain Description: RVT_N Location: 107065-107302 bp Feature: domain Description: RVT_N Location: 107065-107302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 107353-108004 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 107353-108004 bp Feature: domain Description: GIIM Note: maturase Location: 108055-108289 bp Feature: domain Description: GIIM Note: maturase Location: 108055-108289 bp Feature: gene Location: 108808-109011 bp Feature: gene Location: 109995-111242 bp Feature: domain Description: PRK14012 Location: 110034-111240 bp Feature: domain Description: PRK14 012 Location: 110034 -11124 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT apaG (PRK05461), PDDEXK_2 (pfam12784), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PRK14012 (IscS subfamily cysteine desulfurase)