myRT

myRT report for GCA_000153865.1_ASM15386v1

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Seq: GG774580.1 Vibrio cholerae MAK 757 genomic scaffold supercont1.3, whole genome shotgun sequence (343335 bp)
Overview 1 RT 1: 123125-128123 bp Neighborhood of RT #1 [123125, 128149] COG3950 RVT-Retrons LysR Feature: gene Location: 123125-123505 bp Feature: gene Location: 123518-125140 bp Feature: domain Description: COG3950 Location: 123704-125135 bp Feature: domain Description: COG3950 Location: 1 23704-1 251 35 bp Feature: gene Location: 125141-126088 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 125255-125852 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 25255-1 25852 bp Feature: gene Location: 127014-127286 bp Feature: gene Location: 127289-128149 bp Feature: domain Description: LysR Location: 127295-128123 bp Feature: domain Description: LysR Location: 1 27295-1 281 23 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, LysR (COG0583)

Seq: GG774579.1 Vibrio cholerae MAK 757 genomic scaffold supercont1.2, whole genome shotgun sequence (1076983 bp)
Overview 1 RT 1: 13108-17279 bp Neighborhood of RT #1 [13108, 17279] Nudix_Hydrolase_7 RVT-UG14 Feature: gene Location: 13108-13545 bp Feature: domain Description: Nudix_Hydrolase_7 Location: 13120-13513 bp Feature: domain Description: Nudix_Hydrolase_7 Location: 1312 0-13513 bp Feature: gene Location: 13706-14053 bp Feature: gene Location: 14194-15759 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 14629-15106 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 1462 9-15106 bp Feature: gene Location: 15895-16455 bp Feature: gene Location: 16605-17279 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nudix_Hydrolase_7 (cd04664), RVT-UG14