myRT

myRT report for GCA_000153925.1_ASM15392v1

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Seq: DS264358.1 Ruminococcus torques ATCC 27756 Scfld0215 genomic scaffold, whole genome shotgun sequence (209206 bp)
Overview 1 RT 1: 167360-170035 bp Neighborhood of RT #1 [167360, 170040] Phage_holin_5_2 RVT-DGRs Phage_XkdX Feature: gene Location: 167360-167653 bp Feature: domain Description: Phage_holin_5_2 Location: 167405-167636 bp Feature: domain Description: Phage_holin_5_2 Location: 1 67405-1 67636 bp Feature: gene Location: 167666-167989 bp Feature: gene Location: 168008-169204 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 168197-169016 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 681 97-1 6901 6 bp Feature: gene Location: 169415-169900 bp Feature: gene Location: 169897-170040 bp Feature: domain Description: Phage_XkdX Location: 169918-170035 bp Feature: domain Description: Phage_XkdX Location: 1 6991 8-1 70035 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_holin_5_2 (pfam16079), RVT-DGRs, Phage_XkdX (pfam09693)

Seq: DS264356.1 Ruminococcus torques ATCC 27756 Scfld0213 genomic scaffold, whole genome shotgun sequence (251026 bp)
Overview 1 RT 1: 13363-19048 bp Neighborhood of RT #1 [13363, 19734] PRK05755 Gph RVT-GII LytD Feature: gene Location: 13363-15978 bp Feature: domain Description: PRK05755 Location: 13372-15976 bp Feature: domain Description: PRK05755 Location: 13372 -15976 bp Feature: gene Location: 16068-16712 bp Feature: domain Description: Gph Location: 16101-16701 bp Feature: domain Description: Gph Location: 16101-16701 bp Feature: gene Location: 16874-17329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17084-17204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17084-172 04 bp Feature: gene Location: 17316-17459 bp Feature: gene Location: 17872-19734 bp Feature: domain Description: LytD Location: 18529-19048 bp Feature: domain Description: LytD Location: 1852 9-19048 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05755 (DNA polymerase I; Provisional), Gph (COG0546), RVT-GII, LytD (COG4193)