myRT

myRT report for GCA_000154025.1_ASM15402v1

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Seq: DS179513.1 Vibrio harveyi HY01 1104679442569 genomic scaffold, whole genome shotgun sequence (474850 bp)
Overview 1 RT 1: 128456-136189 bp Neighborhood of RT #1 [128456, 136191] GntT VOC_like RVT-UG2 PRK15317 PRK10382 Feature: gene Location: 128456-129913 bp Ori: EDL70026.1 Feature: domain Description: GntT Location: 128471-129797 bp Feature: domain Description: GntT Location: 1 28471 -1 29797 bp Feature: gene Location: 130021-130440 bp Ori: EDL70042.1 Feature: domain Description: VOC_like Location: 130033-130393 bp Feature: domain Description: VOC_like Location: 1 30033-1 30393 bp Feature: gene Location: 132016-133302 bp Ori: EDL70073.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 132223-133003 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 32223-1 33003 bp Feature: gene Location: 133894-135462 bp Ori: EDL70088.1 Gene: ahpF Feature: domain Description: PRK15317 Location: 133897-135457 bp Feature: domain Description: PRK1 531 7 Location: 1 33897-1 35457 bp Feature: gene Location: 135634-136191 bp Ori: EDL70027.1 Gene: ahpC Feature: domain Description: PRK10382 Location: 135637-136189 bp Feature: domain Description: PRK1 0382 Location: 1 35637-1 361 89 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GntT (COG2610), VOC_like (cd16355), RVT-UG2, PRK15317 (alkyl hydroperoxide reductase subunit F; Provisional), PRK10382 (alkyl hydroperoxide reductase subunit C; Provisional)

Seq: DS179487.1 Vibrio harveyi HY01 1104679442417 genomic scaffold, whole genome shotgun sequence (319273 bp)
Overview 1 RT 1: 181774-187460 bp Neighborhood of RT #1 [181774, 187460] HsdM RVT-Retrons Feature: gene Location: 181774-183360 bp Ori: EDL69234.1 Feature: domain Description: HsdM Location: 181780-183061 bp Feature: domain Description: HsdM Location: 181780-183061 bp Feature: gene Location: 184877-185068 bp Feature: gene Location: 185079-186038 bp Ori: EDL70280.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 185280-185871 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1852 80-185871 bp Feature: gene Location: 186285-186518 bp Feature: gene Location: 186570-187460 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-Retrons

Seq: DS179564.1 Vibrio harveyi HY01 1104679442871 genomic scaffold, whole genome shotgun sequence (78673 bp)
Overview 1 RT 1: 41239-45073 bp Neighborhood of RT #1 [41239, 45075] T3SC_IA_SycT-like PRK07883 RVT-Retrons PRK10323 Feature: gene Location: 41239-41667 bp Ori: EDL69317.1 Feature: domain Description: T3SC_IA_SycT-like Location: 41254-41593 bp Feature: domain Description: T3 SC_IA_SycT-like Location: 41254-41593 bp Feature: gene Location: 41733-42347 bp Ori: EDL69287.1 Feature: domain Description: PRK07883 Location: 41751-42264 bp Feature: domain Description: PRK07883 Location: 41751-42264 bp Feature: gene Location: 42909-44081 bp Ori: EDL69282.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 43053-43629 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 43 053 -43 629 bp Feature: gene Location: 44081-44803 bp Feature: gene Location: 44959-45075 bp Ori: EDL69265.1 Feature: domain Description: PRK10323 Location: 44962-45073 bp Feature: domain Description: PRK103 23 Location: 44962-45073 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T3SC_IA_SycT-like (cd17032), PRK07883 (DEDD exonuclease domain-containing protein), RVT-Retrons, PRK10323 (cysteine/O-acetylserine transporter)