myRT

myRT report for GCA_000154465.1_ASM15446v1

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Seq: DS499577.1 Alistipes putredinis DSM 17216 Scfld_02_7 genomic scaffold, whole genome shotgun sequence (1197641 bp)
Overview 1 RT 1: 553308-557423 bp 2 RT 2: 990244-993475 bp 3 RT 3: 1037913-1044408 bp Neighborhood of RT #1 [553308, 557437] RVT-GII Intron_maturas2 dnaG Toprim_2 MobC Neighborhood of RT #2 [990244, 993475] RVT-UG27 DUF3846 Neighborhood of RT #3 [1037913, 1044408] Prophage_tail Prophage_tail RVT-DGRs Feature: gene Location: 553308-553457 bp Feature: gene Location: 553541-553723 bp Feature: gene Location: 554271-556079 bp Ori: EDS02543.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 554535-555357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 554535-555357 bp Feature: domain Description: Intron_maturas2 Location: 555426-555735 bp Feature: domain Description: Intron_maturas2 Location: 555426-555735 bp Feature: gene Location: 556069-557007 bp Ori: EDS02544.1 Feature: domain Description: dnaG Location: 556201-556303 bp Feature: domain Description: dnaG Location: 556201 -556303 bp Feature: domain Description: Toprim_2 Location: 556594-556855 bp Feature: domain Description: Toprim_2 Location: 556594-556855 bp Feature: gene Location: 557081-557437 bp Ori: EDS02545.1 Feature: domain Description: MobC Location: 557300-557423 bp Feature: domain Description: MobC Location: 557300-557423 bp Feature: gene Location: 990244-990471 bp Feature: gene Location: 991348-991599 bp Feature: gene Location: 991686-992963 bp Ori: EDS03036.1 Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 991887-992523 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 991 887-992523 bp Feature: gene Location: 992960-993235 bp Ori: EDS03037.1 Feature: domain Description: DUF3846 Location: 993017-993218 bp Feature: domain Description: DUF3846 Location: 99301 7-99321 8 bp Feature: gene Location: 993236-993475 bp Feature: gene Location: 1037913-1040879 bp Ori: EDS03086.1 Feature: domain Description: Prophage_tail Location: 1038267-1038468 bp Feature: domain Description: Prophage_tail Location: 1 038267-1 038468 bp Feature: domain Description: Prophage_tail Location: 1039089-1039335 bp Feature: domain Description: Prophage_tail Location: 1 039089-1 039335 bp Feature: gene Location: 1040889-1041305 bp Feature: gene Location: 1041271-1042476 bp Ori: EDS03088.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1041649-1042255 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 041 649-1 042255 bp Feature: gene Location: 1042590-1042937 bp Feature: gene Location: 1042981-1044408 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), dnaG (TIGR01391), Toprim_2 (pfam13155), MobC (pfam05713), RVT-UG27, DUF3846 (pfam12957), Prophage_tail (pfam06605), RVT-DGRs

Seq: DS499579.1 Alistipes putredinis DSM 17216 Scfld_02_9 genomic scaffold, whole genome shotgun sequence (626692 bp)
Overview 1 RT 1: 420940-425289 bp Neighborhood of RT #1 [420940, 425289] MobC Toprim_2 RVT-GII Intron_maturas2 Feature: gene Location: 420940-421305 bp Ori: EDS04599.1 Feature: domain Description: MobC Location: 421168-421297 bp Feature: domain Description: MobC Location: 42 1168-42 12 97 bp Feature: gene Location: 421482-422375 bp Ori: EDS04600.1 Feature: domain Description: Toprim_2 Location: 422016-422295 bp Feature: domain Description: Toprim_2 Location: 42 2 016-42 2 2 95 bp Feature: gene Location: 422365-424173 bp Ori: EDS04601.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 422629-423451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 2 62 9-42 3451 bp Feature: domain Description: Intron_maturas2 Location: 423520-423829 bp Feature: domain Description: Intron_maturas2 Location: 42 352 0-42 382 9 bp Feature: gene Location: 424721-424906 bp Feature: gene Location: 424915-425289 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MobC (pfam05713), Toprim_2 (pfam13155), RVT-GII, Intron_maturas2 (pfam01348)