myRT

myRT report for GCA_000154525.1_ASM15452v1

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Seq: DS499667.1 Bacteroides stercoris ATCC 43183 Scfld_02_6 genomic scaffold, whole genome shotgun sequence (46117 bp)
Overview 1 RT 1: 35554-38958 bp Neighborhood of RT #1 [35554, 39026] HTH_17 RVT-Retrons COG3943 Feature: gene Location: 35554-35919 bp Feature: domain Description: HTH_17 Location: 35689-35827 bp Feature: domain Description: HTH_1 7 Location: 35689-35827 bp Feature: gene Location: 36379-36600 bp Feature: gene Location: 36626-37483 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 36788-37313 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 36788-3731 3 bp Feature: gene Location: 37514-38395 bp Feature: gene Location: 38661-39026 bp Feature: domain Description: COG3943 Location: 38700-38958 bp Feature: domain Description: COG3943 Location: 38700-38958 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_17 (pfam12728), RVT-Retrons, COG3943 (Uncharacterized conserved protein )

Seq: DS499674.1 Bacteroides stercoris ATCC 43183 Scfld_02_13 genomic scaffold, whole genome shotgun sequence (695517 bp)
Overview 1 RT 1: 78120-81514 bp Neighborhood of RT #1 [78120, 81514] RVT-DGRs Feature: gene Location: 78120-78245 bp Feature: gene Location: 78242-78670 bp Feature: gene Location: 78633-79820 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 78963-79662 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 78963-79662 bp Feature: gene Location: 79942-80079 bp Feature: gene Location: 80153-81514 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: DS499673.1 Bacteroides stercoris ATCC 43183 Scfld_02_12 genomic scaffold, whole genome shotgun sequence (587129 bp)
Overview 1 RT 1: 69975-71061 bp 2 RT 2: 459218-460205 bp Neighborhood of RT #1 [69975, 71783] RVT-GII Neighborhood of RT #2 [459218, 460864] RVT-GII Feature: gene Location: 69975-71783 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70239-71061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7023 9-71061 bp Feature: gene Location: 459218-460864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 459560-460205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 459560-460205 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII