myRT

myRT report for GCA_000154865.1_ASM15486v1

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Seq: DS607684.1 Providencia stuartii ATCC 25827 Scfld_02_51 genomic scaffold, whole genome shotgun sequence (2162 bp)
Overview 1 RT 1: 1-1632 bp Neighborhood of RT #1 [1, 1632] RVT-UG4 RhsA RhsA Feature: gene Location: 1-208 bp Ori: EDU57234.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4-208 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4-208 bp Feature: gene Location: 585-1154 bp Ori: EDU57235.1 Feature: domain Description: RhsA Location: 597-774 bp Feature: domain Description: RhsA Location: 597-774 bp Feature: domain Description: RhsA Location: 813-1131 bp Feature: domain Description: RhsA Location: 81 3-1 1 31 bp Feature: gene Location: 1381-1632 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, RhsA (COG3209)

Seq: DS607655.1 Providencia stuartii ATCC 25827 Scfld_02_22 genomic scaffold, whole genome shotgun sequence (9559 bp)
Overview 1 RT 1: 6878-9559 bp Neighborhood of RT #1 [6878, 9559] RhsA RVT-UG4 Feature: gene Location: 6878-7048 bp Feature: gene Location: 7021-7464 bp Ori: EDU57238.1 Feature: domain Description: RhsA Location: 7198-7447 bp Feature: domain Description: RhsA Location: 7198-7447 bp Feature: gene Location: 7497-7922 bp Ori: EDU57240.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 7719-7914 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 7719-7914 bp Feature: gene Location: 8397-9347 bp Feature: gene Location: 9359-9559 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RhsA (COG3209), RVT-UG4

Seq: DS607663.1 Providencia stuartii ATCC 25827 Scfld_02_30 genomic scaffold, whole genome shotgun sequence (2296384 bp)
Overview 1 RT 1: 2229804-2239279 bp Neighborhood of RT #1 [2229804, 2239279] YbjD INT_RitA_C_like RVT-UG8 RVT-UG3 Feature: gene Location: 2229804-2231753 bp Ori: EDU60526.1 Feature: domain Description: YbjD Location: 2229807-2231229 bp Feature: domain Description: YbjD Location: 2229807-223 1229 bp Feature: gene Location: 2232134-2232736 bp Ori: EDU60527.1 Feature: domain Description: INT_RitA_C_like Location: 2232188-2232719 bp Feature: domain Description: INT_RitA_C_like Location: 223 2188-223 2719 bp Feature: gene Location: 2233541-2235583 bp Ori: EDU60528.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 2234153-2234603 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 223 4153 -223 4603 bp Feature: gene Location: 2235576-2236925 bp Ori: EDU60529.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 2236032-2236509 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 223 603 2-223 6509 bp Feature: gene Location: 2236928-2237557 bp Feature: gene Location: 2238749-2239279 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjD (COG3593), INT_RitA_C_like (cd01188), RVT-UG8, RVT-UG3

Seq: DS607683.1 Providencia stuartii ATCC 25827 Scfld_02_50 genomic scaffold, whole genome shotgun sequence (361783 bp)
Overview 1 RT 1: 253581-257655 bp Neighborhood of RT #1 [253581, 257717] RVT-UG4 RhsA IstB_IS21_ATP IstB_IS21 Feature: gene Location: 253581-254381 bp Feature: gene Location: 254393-255343 bp Feature: gene Location: 255818-256213 bp Ori: EDU57494.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 256010-256205 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 256010-256205 bp Feature: gene Location: 256197-256898 bp Ori: EDU57495.1 Feature: domain Description: RhsA Location: 256239-256875 bp Feature: domain Description: RhsA Location: 256239-256875 bp Feature: gene Location: 256971-257717 bp Ori: EDU57496.1 Feature: domain Description: IstB_IS21_ATP Location: 257040-257124 bp Feature: domain Description: IstB_IS21_ATP Location: 25704 0-257124 bp Feature: domain Description: IstB_IS21 Location: 257127-257655 bp Feature: domain Description: IstB_IS21 Location: 257127-257655 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, RhsA (COG3209), IstB_IS21_ATP (pfam08483), IstB_IS21 (pfam01695)

Seq: DS607678.1 Providencia stuartii ATCC 25827 Scfld_02_45 genomic scaffold, whole genome shotgun sequence (302403 bp)
Overview 1 RT 1: 113997-118036 bp Neighborhood of RT #1 [113997, 118041] IS285 RVT-UG4 FimA PRK15276 Feature: gene Location: 113997-114863 bp Ori: EDU60695.1 Feature: domain Description: IS285 Location: 114000-114852 bp Feature: domain Description: IS285 Location: 114000-11485 2 bp Feature: gene Location: 114982-116082 bp Feature: gene Location: 116066-116962 bp Ori: EDU60697.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116417-116858 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116417-11685 8 bp Feature: gene Location: 116955-117506 bp Ori: EDU60698.1 Feature: domain Description: FimA Location: 116958-117504 bp Feature: domain Description: FimA Location: 11695 8-1175 04 bp Feature: gene Location: 117514-118041 bp Ori: EDU60699.1 Feature: domain Description: PRK15276 Location: 117586-118036 bp Feature: domain Description: PRK15 276 Location: 1175 86-118036 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IS285 (COG3328), RVT-UG4, FimA (pfam16970), PRK15276 (putative fimbrial subunit SteE; Provisional)