myRT

myRT report for GCA_000154925.1_ASM15492v1

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Seq: DS570667.1 Streptomyces clavuligerus ATCC 27064 supercont1.44 genomic scaffold, whole genome shotgun sequence (55738 bp)
Overview 1 RT 1: 22178-29758 bp Neighborhood of RT #1 [22178, 30150] AbiEii AbiEii RVT-UNC PRK09694 Cas3_C CRISPR_Cse1 Feature: gene Location: 22178-22801 bp Feature: gene Location: 22788-23801 bp Ori: EDY51263.1 Feature: domain Description: AbiEii Location: 22878-22980 bp Feature: domain Description: AbiEii Location: 22878-22980 bp Feature: domain Description: AbiEii Location: 23307-23541 bp Feature: domain Description: AbiEii Location: 23307-23541 bp Feature: gene Location: 23830-25101 bp Ori: EDY51264.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 24100-24547 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 241 00-24547 bp Feature: gene Location: 25211-28225 bp Ori: EDY51265.1 Feature: domain Description: PRK09694 Location: 25226-27311 bp Feature: domain Description: PRK09694 Location: 25226-2731 1 bp Feature: domain Description: Cas3_C Location: 27707-28013 bp Feature: domain Description: Cas3_C Location: 27707-2801 3 bp Feature: gene Location: 28366-30150 bp Ori: EDY51266.1 Feature: domain Description: CRISPR_Cse1 Location: 28369-29758 bp Feature: domain Description: CRISPR_Cse1 Location: 28369-29758 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), RVT-UNC/RVT-UG23/RVT-GII/RVT-CRISPR(RVT-UNC), PRK09694 (CRISPR-associated helicase/endonuclease Cas3), Cas3_C (pfam18395), CRISPR_Cse1 (pfam09481)

Seq: DS570633.1 Streptomyces clavuligerus ATCC 27064 supercont1.10 genomic scaffold, whole genome shotgun sequence (132450 bp)
Overview 1 RT 1: 109089-113647 bp Neighborhood of RT #1 [109089, 113647] Sa_NUDIX RVT-UG23 APH APH Feature: gene Location: 109089-109208 bp Feature: gene Location: 109387-110094 bp Ori: EDY48649.1 Feature: domain Description: Sa_NUDIX Location: 109501-110092 bp Feature: domain Description: Sa_NUDIX Location: 109501-110092 bp Feature: gene Location: 110190-111290 bp Ori: EDY48650.1 Feature: RT Description: RVT-UG23 Note: UG23 RT Location: 110193-110604 bp Feature: RT Description: RVT-UG2 3 Note: UG2 3 RT Location: 110193-110604 bp Feature: gene Location: 112478-113263 bp Ori: EDY48651.1 Feature: domain Description: APH Location: 112601-112907 bp Feature: domain Description: APH Location: 112 601-112 907 bp Feature: domain Description: APH Location: 112940-113141 bp Feature: domain Description: APH Location: 112 940-113141 bp Feature: gene Location: 113525-113647 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Sa_NUDIX (pfam18167), RVT-UG23, APH (pfam01636)

Seq: DS570645.1 Streptomyces clavuligerus ATCC 27064 supercont1.22 genomic scaffold, whole genome shotgun sequence (88284 bp)
Overview 1 RT 1: 38644-42497 bp Neighborhood of RT #1 [38644, 42497] pPIWI_RE_X RVT-GII GIIM Feature: gene Location: 38644-39174 bp Ori: EDY49812.1 Feature: domain Description: pPIWI_RE_X Location: 38656-39088 bp Feature: domain Description: pPIWI_RE_X Location: 3 8656-3 9088 bp Feature: gene Location: 39084-39779 bp Feature: gene Location: 40099-41538 bp Ori: EDY49814.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40429-41113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40429-41113 bp Feature: domain Description: GIIM Note: maturase Location: 41182-41416 bp Feature: domain Description: GIIM Note: maturase Location: 41182-41416 bp Feature: gene Location: 41571-41861 bp Feature: gene Location: 42105-42497 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pPIWI_RE_X, RVT-GII, GIIM (pfam08388)