myRT

myRT report for GCA_000155815.1_ASM15581v1

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Seq: DS995509.1 Bacteroides eggerthii DSM 20697 Scfld1 genomic scaffold, whole genome shotgun sequence (1334896 bp)
Overview 1 RT 1: 422896-433343 bp 2 RT 2: 508495-511978 bp Neighborhood of RT #1 [422896, 433343] INTN1_C_like RVT-UG3 RVT-UG8 Neighborhood of RT #2 [508495, 512055] DUF4134 DUF4134 RVT-GII Intron_maturas2 HNHc DUF4134 DUF4133 Feature: gene Location: 422896-423762 bp Ori: EEC54765.1 Feature: domain Description: INTN1_C_like Location: 423061-423193 bp Feature: domain Description: INTN1 _C_like Location: 423061 -4231 93 bp Feature: gene Location: 424594-424776 bp Feature: gene Location: 425918-427216 bp Ori: EEC54767.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 426278-426749 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 426278-426749 bp Feature: gene Location: 427204-427491 bp Feature: gene Location: 427491-429125 bp Ori: EEC54769.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 427713-428148 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 42771 3-4281 48 bp Feature: gene Location: 430869-431111 bp Feature: gene Location: 431451-433343 bp Feature: gene Location: 508495-508821 bp Ori: EEC54502.1 Feature: domain Description: DUF4134 Location: 508516-508807 bp Feature: domain Description: DUF41 34 Location: 50851 6-508807 bp Feature: gene Location: 508896-509174 bp Ori: EEC54503.1 Feature: domain Description: DUF4134 Location: 508956-509157 bp Feature: domain Description: DUF41 34 Location: 508956-5091 57 bp Feature: gene Location: 509716-511527 bp Ori: EEC54504.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 509980-510802 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 509980-51 0802 bp Feature: domain Description: Intron_maturas2 Location: 510991-511201 bp Feature: domain Description: Intron_maturas2 Location: 51 0991 -51 1 201 bp Feature: domain Description: HNHc Note: nucleases Location: 511351-511456 bp Feature: domain Description: HNHc Note: nucleases Location: 51 1 351 -51 1 456 bp Feature: gene Location: 511552-511746 bp Ori: EEC54505.1 Feature: domain Description: DUF4134 Location: 511642-511732 bp Feature: domain Description: DUF41 34 Location: 51 1 642-51 1 732 bp Feature: gene Location: 511759-512055 bp Ori: EEC54506.1 Feature: domain Description: DUF4133 Location: 511801-511978 bp Feature: domain Description: DUF41 33 Location: 51 1 801 -51 1 978 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INTN1_C_like (cd01185), RVT-UG3, RVT-UG8, DUF4134 (pfam13572), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF4133 (pfam13571)