myRT

myRT report for GCA_000156075.1_ASM15607v1

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Seq: DS995542.1 Bacteroides dorei DSM 17855 Scfld17 genomic scaffold, whole genome shotgun sequence (2489 bp)
Overview 1 RT 1: 106-1888 bp Neighborhood of RT #1 [106, 1917] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 106-1917 bp Ori: EEB22586.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 370-1192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 370-1 1 92 bp Feature: domain Description: Intron_maturas2 Location: 1264-1594 bp Feature: domain Description: Intron_maturas2 Location: 1 264-1 594 bp Feature: domain Description: HNHc Note: nucleases Location: 1738-1888 bp Feature: domain Description: HNHc Note: nucleases Location: 1 738-1 888 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: DS995547.1 Bacteroides dorei DSM 17855 Scfld26 genomic scaffold, whole genome shotgun sequence (2489 bp)
Overview 1 RT 1: 567-2349 bp Neighborhood of RT #1 [567, 2372] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 567-2372 bp Ori: EEB22573.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 831-1653 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 831-1653 bp Feature: domain Description: Intron_maturas2 Location: 1731-2061 bp Feature: domain Description: Intron_maturas2 Location: 1731-2 061 bp Feature: domain Description: HNHc Note: nucleases Location: 2205-2349 bp Feature: domain Description: HNHc Note: nucleases Location: 2 2 05-2 349 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: DS995531.1 Bacteroides dorei DSM 17855 Scfld3 genomic scaffold, whole genome shotgun sequence (832081 bp)
Overview 1 RT 1: 382878-388564 bp 2 RT 2: 508586-512395 bp Neighborhood of RT #1 [382878, 388564] HTH_17 HTH_17 RVT-UG3 RVT-UG8 Neighborhood of RT #2 [508586, 512395] RVT-GII Intron_maturas2 Toprim_2 Feature: gene Location: 382878-383228 bp Ori: EEB26915.1 Feature: domain Description: HTH_17 Location: 382998-383127 bp Feature: domain Description: HTH_17 Location: 3 82998-3 83 127 bp Feature: gene Location: 383221-383529 bp Ori: EEB26916.1 Feature: domain Description: HTH_17 Location: 383365-383509 bp Feature: domain Description: HTH_17 Location: 3 83 3 65-3 83 509 bp Feature: gene Location: 383759-385201 bp Ori: EEB26917.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 384236-384752 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3 8423 6-3 84752 bp Feature: gene Location: 385192-387453 bp Ori: EEB26918.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 385804-386260 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3 85804-3 86260 bp Feature: gene Location: 388106-388246 bp Feature: gene Location: 388406-388564 bp Feature: gene Location: 508586-508735 bp Feature: gene Location: 508819-509001 bp Feature: gene Location: 509549-511357 bp Ori: EEB27026.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 509813-510635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 509813 -51063 5 bp Feature: domain Description: Intron_maturas2 Location: 510704-511013 bp Feature: domain Description: Intron_maturas2 Location: 510704-511013 bp Feature: gene Location: 511347-512240 bp Ori: EEB27027.1 Feature: domain Description: Toprim_2 Location: 511881-512160 bp Feature: domain Description: Toprim_2 Location: 511881-512160 bp Feature: gene Location: 512237-512395 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_17 (pfam12728), RVT-UG3, RVT-UG8, RVT-GII, Intron_maturas2 (pfam01348), Toprim_2 (pfam13155)