myRT

myRT report for GCA_000156655.1_ASM15665v1

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Seq: DS996846.1 Eubacterium biforme DSM 3989 Scfld10 genomic scaffold, whole genome shotgun sequence (166911 bp)
Overview 1 RT 1: 126814-132186 bp Neighborhood of RT #1 [126814, 132186] Tup_N DUF4379 DUF4379 DUF4379 DUF4379 DUF4379 DUF4379 DUF4379 DUF4379 DUF4379 DUF4379 DUF4379 DUF4379 DUF4379 RVT-GII GIIM RVT-GII Feature: gene Location: 126814-127533 bp Ori: EEC89325.1 Feature: domain Description: Tup_N Location: 127141-127321 bp Feature: domain Description: Tup_N Location: 1 271 41 -1 27321 bp Feature: gene Location: 127526-130282 bp Ori: EEC89326.1 Feature: domain Description: DUF4379 Location: 127562-127721 bp Feature: domain Description: DUF4379 Location: 1 27562-1 27721 bp Feature: domain Description: DUF4379 Location: 127754-127913 bp Feature: domain Description: DUF4379 Location: 1 27754-1 2791 3 bp Feature: domain Description: DUF4379 Location: 127970-128150 bp Feature: domain Description: DUF4379 Location: 1 27970-1 281 50 bp Feature: domain Description: DUF4379 Location: 128192-128357 bp Feature: domain Description: DUF4379 Location: 1 281 92-1 28357 bp Feature: domain Description: DUF4379 Location: 128405-128564 bp Feature: domain Description: DUF4379 Location: 1 28405-1 28564 bp Feature: domain Description: DUF4379 Location: 128597-128753 bp Feature: domain Description: DUF4379 Location: 1 28597-1 28753 bp Feature: domain Description: DUF4379 Location: 128804-128960 bp Feature: domain Description: DUF4379 Location: 1 28804-1 28960 bp Feature: domain Description: DUF4379 Location: 129017-129170 bp Feature: domain Description: DUF4379 Location: 1 2901 7-1 291 70 bp Feature: domain Description: DUF4379 Location: 129221-129380 bp Feature: domain Description: DUF4379 Location: 1 29221 -1 29380 bp Feature: domain Description: DUF4379 Location: 129431-129590 bp Feature: domain Description: DUF4379 Location: 1 29431 -1 29590 bp Feature: domain Description: DUF4379 Location: 129641-129800 bp Feature: domain Description: DUF4379 Location: 1 29641 -1 29800 bp Feature: domain Description: DUF4379 Location: 129851-130010 bp Feature: domain Description: DUF4379 Location: 1 29851 -1 3001 0 bp Feature: domain Description: DUF4379 Location: 130061-130244 bp Feature: domain Description: DUF4379 Location: 1 30061 -1 30244 bp Feature: gene Location: 130381-130983 bp Ori: EEC89327.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 130387-130504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 30387-1 30504 bp Feature: domain Description: GIIM Note: maturase Location: 130558-130765 bp Feature: domain Description: GIIM Note: maturase Location: 1 30558-1 30765 bp Feature: gene Location: 130980-131681 bp Ori: EEC89328.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 131181-131658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 31 1 81 -1 31 658 bp Feature: gene Location: 131816-131980 bp Feature: gene Location: 132064-132186 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tup_N (pfam08581), DUF4379 (pfam14311), RVT-GII, GIIM (pfam08388)

Seq: DS996841.1 Eubacterium biforme DSM 3989 Scfld5 genomic scaffold, whole genome shotgun sequence (708572 bp)
Overview 1 RT 1: 447693-450484 bp 2 RT 2: 458566-463289 bp Neighborhood of RT #1 [447693, 450564] PRK10562 group_II_RT_mat RVT-GII Acetyltransf_1 Neighborhood of RT #2 [458566, 463348] Maff2 VirD4 RVT-GII VirD4 Feature: gene Location: 447693-448118 bp Ori: EEC90702.1 Feature: domain Description: PRK10562 Location: 447696-448113 bp Feature: domain Description: PRK10562 Location: 447696-448113 bp Feature: gene Location: 448250-448567 bp Ori: EEC90703.1 Feature: domain Description: group_II_RT_mat Note: maturase Location: 448262-448475 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4482 62 -448475 bp Feature: gene Location: 448634-449545 bp Ori: EEC90704.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 448889-449501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 448889-449501 bp Feature: gene Location: 449635-449814 bp Feature: gene Location: 450043-450564 bp Ori: EEC90706.1 Feature: domain Description: Acetyltransf_1 Location: 450169-450484 bp Feature: domain Description: Acetyltransf_1 Location: 450169-450484 bp Feature: gene Location: 458566-458697 bp Ori: EEC90719.1 Feature: domain Description: Maff2 Location: 458569-458695 bp Feature: domain Description: Maff2 Location: 458569-458695 bp Feature: gene Location: 458825-460048 bp Ori: EEC90720.1 Feature: domain Description: VirD4 Location: 458888-459905 bp Feature: domain Description: VirD4 Location: 458888-459905 bp Feature: gene Location: 460145-462016 bp Ori: EEC90721.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 460457-461201 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 460457-4612 01 bp Feature: gene Location: 462174-462476 bp Feature: gene Location: 462644-463348 bp Ori: EEC90723.1 Feature: domain Description: VirD4 Location: 462902-463289 bp Feature: domain Description: VirD4 Location: 462 902 -4632 89 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10562 (putative acetyltransferase; Provisional), group_II_RT_mat (TIGR04416), RVT-GII, Acetyltransf_1 (pfam00583), Maff2 (pfam12750), VirD4 (COG3505)

Seq: DS996875.1 Eubacterium biforme DSM 3989 Scfld112 genomic scaffold, whole genome shotgun sequence (1906 bp)
Overview 1 RT 1: 426-1422 bp Neighborhood of RT #1 [426, 1802] RVT-GII Feature: gene Location: 426-1802 bp Ori: EEC88879.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 759-1422 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 759-1422 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII