myRT

myRT report for GCA_000157115.2_Escherichia_sp_3_2_53FAA_V2

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Seq: KQ235744.1 Escherichia sp. 3_2_53FAA genomic scaffold supercont2.6, whole genome shotgun sequence (176042 bp)
Overview 1 RT 1: 100435-102934 bp 2 RT 2: 114204-119212 bp Neighborhood of RT #1 [100435, 102934] PRK10173 PRK10173 RVT-GII PHA02517 Neighborhood of RT #2 [114204, 119250] PRK08181 rve RVT-GII GIIM PHA02517 InsE Feature: gene Location: 100435-100884 bp Ori: KMV75129.1 Feature: domain Description: PRK10173 Location: 100438-100876 bp Feature: domain Description: PRK1 01 73 Location: 1 00438-1 00876 bp Feature: gene Location: 100859-101179 bp Ori: KMV75130.1 Feature: domain Description: PRK10173 Location: 100862-101090 bp Feature: domain Description: PRK1 01 73 Location: 1 00862-1 01 090 bp Feature: gene Location: 101218-101721 bp Ori: EEH89354.2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101491-101560 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 491 -1 01 560 bp Feature: gene Location: 102313-102792 bp Ori: KMV75131.1 Feature: domain Description: PHA02517 Location: 102373-102727 bp Feature: domain Description: PHA0251 7 Location: 1 02373-1 02727 bp Feature: gene Location: 102792-102934 bp Feature: gene Location: 114204-114959 bp Ori: KMV75107.1 Feature: domain Description: PRK08181 Location: 114228-114939 bp Feature: domain Description: PRK081 81 Location: 1 1 4228-1 1 4939 bp Feature: gene Location: 114956-116455 bp Ori: KMV75108.1 Feature: domain Description: rve Location: 115328-115721 bp Feature: domain Description: rve Location: 1 1 5328-1 1 5721 bp Feature: gene Location: 116902-118344 bp Ori: KMV75073.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117094-117826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 7094-1 1 7826 bp Feature: domain Description: GIIM Note: maturase Location: 117901-118099 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 7901 -1 1 8099 bp Feature: gene Location: 118461-118817 bp Ori: KMV75074.1 Feature: domain Description: PHA02517 Location: 118464-118773 bp Feature: domain Description: PHA0251 7 Location: 1 1 8464-1 1 8773 bp Feature: gene Location: 118846-119250 bp Ori: KMV75075.1 Feature: domain Description: InsE Location: 118876-119212 bp Feature: domain Description: InsE Location: 1 1 8876-1 1 921 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII, PHA02517 (putative transposase OrfB; Reviewed), PRK08181 (transposase; Validated), rve (pfam00665), GIIM (pfam08388), InsE (COG2963)

Seq: KQ235741.1 Escherichia sp. 3_2_53FAA genomic scaffold supercont2.3, whole genome shotgun sequence (782863 bp)
Overview 1 RT 1: 585125-590566 bp Neighborhood of RT #1 [585125, 590574] PFLE_PFLC RVT-GII RVT-GII GIIM YesM Feature: gene Location: 585125-586042 bp Ori: EEH87928.1 Feature: domain Description: PFLE_PFLC Location: 585161-586016 bp Feature: domain Description: PFLE_PFLC Location: 585161-586016 bp Feature: gene Location: 586179-587084 bp Feature: gene Location: 587674-588213 bp Ori: EEH87925.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 588004-588082 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 588004-588082 bp Feature: gene Location: 588280-588762 bp Ori: EEH87924.2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 588289-588529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5882 89-58852 9 bp Feature: domain Description: GIIM Note: maturase Location: 588577-588757 bp Feature: domain Description: GIIM Note: maturase Location: 588577-588757 bp Feature: gene Location: 589084-589272 bp Feature: gene Location: 589345-590574 bp Ori: EEH87921.2 Feature: domain Description: YesM Location: 589825-590566 bp Feature: domain Description: YesM Location: 58982 5-590566 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PFLE_PFLC (TIGR02494), RVT-GII, GIIM (pfam08388), YesM (COG2972)